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Statistical dependence of protein secondary structure on amino acid bigrams [Statistička zavisnost sekundarne strukture proteina od frekvencije bigrama aminokiselina]
Statistička zavisnost sekundarne strukture proteina od frekvencije digrama aminokiselina
dc.creator | Živković, Miodrag | |
dc.creator | Malkov, Saša | |
dc.creator | Zarić, Snežana D. | |
dc.creator | Vujošević-Janičić, Milena | |
dc.creator | Tomašević, Jelena | |
dc.creator | Predović, Goran | |
dc.creator | Blažić, Novica | |
dc.creator | Beljanski, Miloš V. | |
dc.date.accessioned | 2018-11-22T00:09:15Z | |
dc.date.available | 2018-11-22T00:09:15Z | |
dc.date.issued | 2006 | |
dc.identifier.issn | 1451-9372 | |
dc.identifier.uri | https://cherry.chem.bg.ac.rs/handle/123456789/215 | |
dc.description.abstract | The statistical dependence of protein secondary structure on amino acid bigram frequencies was studied. Proteins in the PDBSELECT subset of the Protein Data Bank database were investigated. Protein secondary structures were determined using DSSP software. The conditional probabilities of protein secondary structures were calculated and presented. The results on bigrams show the frequencies of all the possible bigrams in all secondary structure types. These results elucidate some factors important for the prediction of the secondary structures of proteins based on the amino acid sequence. © 2017, CI and CEQ. All rights reserved. | en |
dc.description.abstract | U radu je opisana statistička zavisnost sekundarne strukture proteina od bigrama aminokiselina. Istraživanje je urađeno na proteinima koji se nalaze u podskupu PDBSELECT baze podataka o proteinima Protein Data Bank (PDB). Sekundarne strukture proteina su određene primenom programa DSSP. Izračunate su i prikazane uslovne verovatnoće pojavljivanja različitih sekundarnih struktura. Rezultati za bigrame su prikazani za sve tipove sekundarnih struktura. Rezultati ukazuju na faktore koji su značajni za predviđanje sekundarne strukture proteina koje je zasnovano na redosledu aminokiselina u proteinu. | sr |
dc.rights | openAccess | |
dc.rights.uri | https://creativecommons.org/licenses/by-nc-nd/4.0/ | |
dc.source | Chemical Industry and Chemical Engineering Quarterly / CICEQ | |
dc.subject | Amino-acid pairs | en |
dc.subject | Bigram | en |
dc.subject | protein secondary structure | en |
dc.subject | Bigram frequencies | en |
dc.subject | bigram | en |
dc.subject | Protein secondary structure | en |
dc.subject | bigram frequencies | en |
dc.subject | parovi aminokiselina | sr |
dc.subject | sekundarena struktura proteina | sr |
dc.subject | bigram | sr |
dc.subject | učestalost bigrama | sr |
dc.title | Statistical dependence of protein secondary structure on amino acid bigrams [Statistička zavisnost sekundarne strukture proteina od frekvencije bigrama aminokiselina] | en |
dc.title | Statistička zavisnost sekundarne strukture proteina od frekvencije digrama aminokiselina | sr |
dc.type | article | |
dc.rights.license | BY-NC-ND | |
dcterms.abstract | Живковић, Миодраг; Зарић, Снежана; Блажић, Новица; Предовић, Горан; Томашевић, Јелена; Вујошевић-Јаничић, Милена; Малков, Саша; Бељански, Милош В.; Статистичка зависност секундарне структуре протеина од фреквенције диграма аминокиселина; Статистичка зависност секундарне структуре протеина од фреквенције диграма аминокиселина; | |
dc.citation.volume | 12 | |
dc.citation.issue | 1 | |
dc.citation.spage | 82 | |
dc.citation.epage | 85 | |
dc.identifier.doi | 10.2298/CICEQ0601082Z | |
dc.citation.other | 12(1): 82-85 | |
dc.type.version | publishedVersion | |
dc.identifier.scopus | 2-s2.0-85034436993 | |
dc.identifier.fulltext | https://cherry.chem.bg.ac.rs/bitstream/id/9154/213.pdf |