TY  - DATA
AU  - Simić, Stefan
AU  - Jeremić, Sanja
AU  - Đokić, Lidija
AU  - Božić, Nataša
AU  - Vujčić, Zoran
AU  - Lončar, Nikola L.
AU  - Senthamaraikannan, Ramsankar
AU  - Babu, Ramesh P.
AU  - Opsenica, Igor
AU  - Nikodinović-Runić, Jasmina
PY  - 2020
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/3357
T2  - Enzyme and Microbial Technology
T1  - Supplementary data for article: Simić, S.; Jeremic, S.; Djokic, L.; Božić, N.; Vujčić, Z.; Lončar, N.; Senthamaraikannan, R.; Babu, R.; Opsenica, I. M.; Nikodinovic-Runic, J. Development of an Efficient Biocatalytic System Based on Bacterial Laccase for the Oxidation of Selected 1,4-Dihydropyridines. Enzyme and Microbial Technology 2020, 132. https://doi.org/10.1016/j.enzmictec.2019.109411
UR  - https://hdl.handle.net/21.15107/rcub_cherry_3357
ER  - 

@misc{
author = "Simić, Stefan and Jeremić, Sanja and Đokić, Lidija and Božić, Nataša and Vujčić, Zoran and Lončar, Nikola L. and Senthamaraikannan, Ramsankar and Babu, Ramesh P. and Opsenica, Igor and Nikodinović-Runić, Jasmina",
year = "2020",
journal = "Enzyme and Microbial Technology",
title = "Supplementary data for article: Simić, S.; Jeremic, S.; Djokic, L.; Božić, N.; Vujčić, Z.; Lončar, N.; Senthamaraikannan, R.; Babu, R.; Opsenica, I. M.; Nikodinovic-Runic, J. Development of an Efficient Biocatalytic System Based on Bacterial Laccase for the Oxidation of Selected 1,4-Dihydropyridines. Enzyme and Microbial Technology 2020, 132. https://doi.org/10.1016/j.enzmictec.2019.109411",
url = "https://hdl.handle.net/21.15107/rcub_cherry_3357"
}

Simić, S., Jeremić, S., Đokić, L., Božić, N., Vujčić, Z., Lončar, N. L., Senthamaraikannan, R., Babu, R. P., Opsenica, I.,& Nikodinović-Runić, J.. (2020). Supplementary data for article: Simić, S.; Jeremic, S.; Djokic, L.; Božić, N.; Vujčić, Z.; Lončar, N.; Senthamaraikannan, R.; Babu, R.; Opsenica, I. M.; Nikodinovic-Runic, J. Development of an Efficient Biocatalytic System Based on Bacterial Laccase for the Oxidation of Selected 1,4-Dihydropyridines. Enzyme and Microbial Technology 2020, 132. https://doi.org/10.1016/j.enzmictec.2019.109411. in Enzyme and Microbial Technology.
https://hdl.handle.net/21.15107/rcub_cherry_3357

Simić S, Jeremić S, Đokić L, Božić N, Vujčić Z, Lončar NL, Senthamaraikannan R, Babu RP, Opsenica I, Nikodinović-Runić J. Supplementary data for article: Simić, S.; Jeremic, S.; Djokic, L.; Božić, N.; Vujčić, Z.; Lončar, N.; Senthamaraikannan, R.; Babu, R.; Opsenica, I. M.; Nikodinovic-Runic, J. Development of an Efficient Biocatalytic System Based on Bacterial Laccase for the Oxidation of Selected 1,4-Dihydropyridines. Enzyme and Microbial Technology 2020, 132. https://doi.org/10.1016/j.enzmictec.2019.109411. in Enzyme and Microbial Technology. 2020;.
https://hdl.handle.net/21.15107/rcub_cherry_3357 .

Simić, Stefan, Jeremić, Sanja, Đokić, Lidija, Božić, Nataša, Vujčić, Zoran, Lončar, Nikola L., Senthamaraikannan, Ramsankar, Babu, Ramesh P., Opsenica, Igor, Nikodinović-Runić, Jasmina, "Supplementary data for article: Simić, S.; Jeremic, S.; Djokic, L.; Božić, N.; Vujčić, Z.; Lončar, N.; Senthamaraikannan, R.; Babu, R.; Opsenica, I. M.; Nikodinovic-Runic, J. Development of an Efficient Biocatalytic System Based on Bacterial Laccase for the Oxidation of Selected 1,4-Dihydropyridines. Enzyme and Microbial Technology 2020, 132. https://doi.org/10.1016/j.enzmictec.2019.109411" in Enzyme and Microbial Technology (2020),
https://hdl.handle.net/21.15107/rcub_cherry_3357 .

TY  - JOUR
AU  - Simić, Stefan
AU  - Jeremić, Sanja
AU  - Đokić, Lidija
AU  - Božić, Nataša
AU  - Vujčić, Zoran
AU  - Lončar, Nikola L.
AU  - Senthamaraikannan, Ramsankar
AU  - Babu, Ramesh P.
AU  - Opsenica, Igor
AU  - Nikodinović-Runić, Jasmina
PY  - 2020
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/3356
AB  - Biocatalytic oxidations mediated by laccases are gaining importance due to their versatility and beneficial environmental effects. In this study, the oxidation of 1,4-dihydropyridines has been performed using three different types of bacterial laccase-based catalysts: purified laccase from Bacillus licheniformis ATCC 9945a (BliLacc), Escherichia coli whole cells expressing this laccase, and bacterial nanocellulose (BNC) supported BliLacc catalysts. The catalysts based on bacterial laccase were compared to the commercially available Trametes versicolor laccase (TvLacc). The oxidation product of 2,6-dimethyl-1,4-dihydropyridine-3,5-dicarboxylate was obtained within 7–24 h with good yields (70–99%) with all three biocatalysts. The substrate scope was examined with five additional 1,4-dihydropyridines, one of which was oxidized in high yield. Whole-cell biocatalyst was stable when stored for up to 1-month at 4 °C. In addition, evidence has been provided that multicopper oxidase CueO from the E. coli expression host contributed to the oxidation efficiency of the whole-cell biocatalyst. The immobilized whole-cell biocatalyst showed satisfactory activity and retained 37% of its original activity after three biotransformation cycles.
T2  - Enzyme and Microbial Technology
T1  - Development of an efficient biocatalytic system based on bacterial laccase for the oxidation of selected 1,4-dihydropyridines
VL  - 132
DO  - 10.1016/j.enzmictec.2019.109411
ER  - 

@article{
author = "Simić, Stefan and Jeremić, Sanja and Đokić, Lidija and Božić, Nataša and Vujčić, Zoran and Lončar, Nikola L. and Senthamaraikannan, Ramsankar and Babu, Ramesh P. and Opsenica, Igor and Nikodinović-Runić, Jasmina",
year = "2020",
abstract = "Biocatalytic oxidations mediated by laccases are gaining importance due to their versatility and beneficial environmental effects. In this study, the oxidation of 1,4-dihydropyridines has been performed using three different types of bacterial laccase-based catalysts: purified laccase from Bacillus licheniformis ATCC 9945a (BliLacc), Escherichia coli whole cells expressing this laccase, and bacterial nanocellulose (BNC) supported BliLacc catalysts. The catalysts based on bacterial laccase were compared to the commercially available Trametes versicolor laccase (TvLacc). The oxidation product of 2,6-dimethyl-1,4-dihydropyridine-3,5-dicarboxylate was obtained within 7–24 h with good yields (70–99%) with all three biocatalysts. The substrate scope was examined with five additional 1,4-dihydropyridines, one of which was oxidized in high yield. Whole-cell biocatalyst was stable when stored for up to 1-month at 4 °C. In addition, evidence has been provided that multicopper oxidase CueO from the E. coli expression host contributed to the oxidation efficiency of the whole-cell biocatalyst. The immobilized whole-cell biocatalyst showed satisfactory activity and retained 37% of its original activity after three biotransformation cycles.",
journal = "Enzyme and Microbial Technology",
title = "Development of an efficient biocatalytic system based on bacterial laccase for the oxidation of selected 1,4-dihydropyridines",
volume = "132",
doi = "10.1016/j.enzmictec.2019.109411"
}

Simić, S., Jeremić, S., Đokić, L., Božić, N., Vujčić, Z., Lončar, N. L., Senthamaraikannan, R., Babu, R. P., Opsenica, I.,& Nikodinović-Runić, J.. (2020). Development of an efficient biocatalytic system based on bacterial laccase for the oxidation of selected 1,4-dihydropyridines. in Enzyme and Microbial Technology, 132.
https://doi.org/10.1016/j.enzmictec.2019.109411

Simić S, Jeremić S, Đokić L, Božić N, Vujčić Z, Lončar NL, Senthamaraikannan R, Babu RP, Opsenica I, Nikodinović-Runić J. Development of an efficient biocatalytic system based on bacterial laccase for the oxidation of selected 1,4-dihydropyridines. in Enzyme and Microbial Technology. 2020;132.
doi:10.1016/j.enzmictec.2019.109411 .

Simić, Stefan, Jeremić, Sanja, Đokić, Lidija, Božić, Nataša, Vujčić, Zoran, Lončar, Nikola L., Senthamaraikannan, Ramsankar, Babu, Ramesh P., Opsenica, Igor, Nikodinović-Runić, Jasmina, "Development of an efficient biocatalytic system based on bacterial laccase for the oxidation of selected 1,4-dihydropyridines" in Enzyme and Microbial Technology, 132 (2020),
https://doi.org/10.1016/j.enzmictec.2019.109411 . .

TY  - JOUR
AU  - Jeremić, Sanja
AU  - Đokić, Lidija
AU  - Ajdačić, Vladimir
AU  - Božinović, Nina S.
AU  - Pavlović, Vladimir D.
AU  - Manojlović, Dragan D.
AU  - Babu, Ramesh P.
AU  - Senthamaraikannan, Ramsankar
AU  - Rojas, Orlando
AU  - Opsenica, Igor
AU  - Nikodinović-Runić, Jasmina
PY  - 2019
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/2866
AB  - Bacterial nanocellulose (BNC) emerged as an attractive advanced biomaterial that provides desirable properties such as high strength, lightweight, tailorable surface chemistry, hydrophilicity, and biodegradability. BNC was successfully obtained from a wide range of carbon sources including sugars derived from grass biomass using Komagataeibacter medellinensis ID13488 strain with yields up to 6 g L −1 in static fermentation. Produced BNC was utilized in straightforward catalyst preparation as a solid support for two different transition metals, palladium and copper with metal loading of 20 and 3 wt%, respectively. Sustainable catalysts were applied in the synthesis of valuable fine chemicals, such as biphenyl-4-amine and 4′-fluorobiphenyl-4-amine, used in drug discovery, perfumes and dye industries with excellent product yields of up to 99%. Pd/BNC catalyst was reused 4 times and applied in two consecutive reactions, Suzuki-Miyaura cross-coupling reaction followed by hydrogenation of nitro to amino group while Cu/BNC catalyst was examined in Chan-Lam coupling reaction. Overall, the environmentally benign process of obtaining nanocellulose from biomass, followed by its utilisation as a solid support in metal-catalysed reactions and its recovery has been described. These findings reveal that BNC is a good support material, and it can be used as a support for different catalytic systems.
PB  - Elsevier
T2  - International Journal of Biological Macromolecules
T1  - Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions
VL  - 129
SP  - 351
EP  - 360
DO  - 10.1016/j.ijbiomac.2019.01.154
ER  - 

@article{
author = "Jeremić, Sanja and Đokić, Lidija and Ajdačić, Vladimir and Božinović, Nina S. and Pavlović, Vladimir D. and Manojlović, Dragan D. and Babu, Ramesh P. and Senthamaraikannan, Ramsankar and Rojas, Orlando and Opsenica, Igor and Nikodinović-Runić, Jasmina",
year = "2019",
abstract = "Bacterial nanocellulose (BNC) emerged as an attractive advanced biomaterial that provides desirable properties such as high strength, lightweight, tailorable surface chemistry, hydrophilicity, and biodegradability. BNC was successfully obtained from a wide range of carbon sources including sugars derived from grass biomass using Komagataeibacter medellinensis ID13488 strain with yields up to 6 g L −1 in static fermentation. Produced BNC was utilized in straightforward catalyst preparation as a solid support for two different transition metals, palladium and copper with metal loading of 20 and 3 wt%, respectively. Sustainable catalysts were applied in the synthesis of valuable fine chemicals, such as biphenyl-4-amine and 4′-fluorobiphenyl-4-amine, used in drug discovery, perfumes and dye industries with excellent product yields of up to 99%. Pd/BNC catalyst was reused 4 times and applied in two consecutive reactions, Suzuki-Miyaura cross-coupling reaction followed by hydrogenation of nitro to amino group while Cu/BNC catalyst was examined in Chan-Lam coupling reaction. Overall, the environmentally benign process of obtaining nanocellulose from biomass, followed by its utilisation as a solid support in metal-catalysed reactions and its recovery has been described. These findings reveal that BNC is a good support material, and it can be used as a support for different catalytic systems.",
publisher = "Elsevier",
journal = "International Journal of Biological Macromolecules",
title = "Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions",
volume = "129",
pages = "351-360",
doi = "10.1016/j.ijbiomac.2019.01.154"
}

Jeremić, S., Đokić, L., Ajdačić, V., Božinović, N. S., Pavlović, V. D., Manojlović, D. D., Babu, R. P., Senthamaraikannan, R., Rojas, O., Opsenica, I.,& Nikodinović-Runić, J.. (2019). Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions. in International Journal of Biological Macromolecules
Elsevier., 129, 351-360.
https://doi.org/10.1016/j.ijbiomac.2019.01.154

Jeremić S, Đokić L, Ajdačić V, Božinović NS, Pavlović VD, Manojlović DD, Babu RP, Senthamaraikannan R, Rojas O, Opsenica I, Nikodinović-Runić J. Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions. in International Journal of Biological Macromolecules. 2019;129:351-360.
doi:10.1016/j.ijbiomac.2019.01.154 .

Jeremić, Sanja, Đokić, Lidija, Ajdačić, Vladimir, Božinović, Nina S., Pavlović, Vladimir D., Manojlović, Dragan D., Babu, Ramesh P., Senthamaraikannan, Ramsankar, Rojas, Orlando, Opsenica, Igor, Nikodinović-Runić, Jasmina, "Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions" in International Journal of Biological Macromolecules, 129 (2019):351-360,
https://doi.org/10.1016/j.ijbiomac.2019.01.154 . .

TY  - JOUR
AU  - Jeremić, Sanja
AU  - Đokić, Lidija
AU  - Ajdačić, Vladimir
AU  - Božinović, Nina S.
AU  - Pavlović, Vladimir D.
AU  - Manojlović, Dragan D.
AU  - Babu, Ramesh P.
AU  - Senthamaraikannan, Ramsankar
AU  - Rojas, Orlando
AU  - Opsenica, Igor
AU  - Nikodinović-Runić, Jasmina
PY  - 2019
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/2850
AB  - Bacterial nanocellulose (BNC) emerged as an attractive advanced biomaterial that provides desirable properties such as high strength, lightweight, tailorable surface chemistry, hydrophilicity, and biodegradability. BNC was successfully obtained from a wide range of carbon sources including sugars derived from grass biomass using Komagataeibacter medellinensis ID13488 strain with yields up to 6 g L −1 in static fermentation. Produced BNC was utilized in straightforward catalyst preparation as a solid support for two different transition metals, palladium and copper with metal loading of 20 and 3 wt%, respectively. Sustainable catalysts were applied in the synthesis of valuable fine chemicals, such as biphenyl-4-amine and 4′-fluorobiphenyl-4-amine, used in drug discovery, perfumes and dye industries with excellent product yields of up to 99%. Pd/BNC catalyst was reused 4 times and applied in two consecutive reactions, Suzuki-Miyaura cross-coupling reaction followed by hydrogenation of nitro to amino group while Cu/BNC catalyst was examined in Chan-Lam coupling reaction. Overall, the environmentally benign process of obtaining nanocellulose from biomass, followed by its utilisation as a solid support in metal-catalysed reactions and its recovery has been described. These findings reveal that BNC is a good support material, and it can be used as a support for different catalytic systems.
PB  - Elsevier
T2  - International Journal of Biological Macromolecules
T1  - Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions
VL  - 129
SP  - 351
EP  - 360
DO  - 10.1016/j.ijbiomac.2019.01.154
ER  - 

@article{
author = "Jeremić, Sanja and Đokić, Lidija and Ajdačić, Vladimir and Božinović, Nina S. and Pavlović, Vladimir D. and Manojlović, Dragan D. and Babu, Ramesh P. and Senthamaraikannan, Ramsankar and Rojas, Orlando and Opsenica, Igor and Nikodinović-Runić, Jasmina",
year = "2019",
abstract = "Bacterial nanocellulose (BNC) emerged as an attractive advanced biomaterial that provides desirable properties such as high strength, lightweight, tailorable surface chemistry, hydrophilicity, and biodegradability. BNC was successfully obtained from a wide range of carbon sources including sugars derived from grass biomass using Komagataeibacter medellinensis ID13488 strain with yields up to 6 g L −1 in static fermentation. Produced BNC was utilized in straightforward catalyst preparation as a solid support for two different transition metals, palladium and copper with metal loading of 20 and 3 wt%, respectively. Sustainable catalysts were applied in the synthesis of valuable fine chemicals, such as biphenyl-4-amine and 4′-fluorobiphenyl-4-amine, used in drug discovery, perfumes and dye industries with excellent product yields of up to 99%. Pd/BNC catalyst was reused 4 times and applied in two consecutive reactions, Suzuki-Miyaura cross-coupling reaction followed by hydrogenation of nitro to amino group while Cu/BNC catalyst was examined in Chan-Lam coupling reaction. Overall, the environmentally benign process of obtaining nanocellulose from biomass, followed by its utilisation as a solid support in metal-catalysed reactions and its recovery has been described. These findings reveal that BNC is a good support material, and it can be used as a support for different catalytic systems.",
publisher = "Elsevier",
journal = "International Journal of Biological Macromolecules",
title = "Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions",
volume = "129",
pages = "351-360",
doi = "10.1016/j.ijbiomac.2019.01.154"
}

Jeremić, S., Đokić, L., Ajdačić, V., Božinović, N. S., Pavlović, V. D., Manojlović, D. D., Babu, R. P., Senthamaraikannan, R., Rojas, O., Opsenica, I.,& Nikodinović-Runić, J.. (2019). Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions. in International Journal of Biological Macromolecules
Elsevier., 129, 351-360.
https://doi.org/10.1016/j.ijbiomac.2019.01.154

Jeremić S, Đokić L, Ajdačić V, Božinović NS, Pavlović VD, Manojlović DD, Babu RP, Senthamaraikannan R, Rojas O, Opsenica I, Nikodinović-Runić J. Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions. in International Journal of Biological Macromolecules. 2019;129:351-360.
doi:10.1016/j.ijbiomac.2019.01.154 .

Jeremić, Sanja, Đokić, Lidija, Ajdačić, Vladimir, Božinović, Nina S., Pavlović, Vladimir D., Manojlović, Dragan D., Babu, Ramesh P., Senthamaraikannan, Ramsankar, Rojas, Orlando, Opsenica, Igor, Nikodinović-Runić, Jasmina, "Production of bacterial nanocellulose (BNC) and its application as a solid support in transition metal catalysed cross-coupling reactions" in International Journal of Biological Macromolecules, 129 (2019):351-360,
https://doi.org/10.1016/j.ijbiomac.2019.01.154 . .

TY  - DATA
AU  - Spasić, Jelena
AU  - Mandić, Mina
AU  - Đokić, Lidija
AU  - Nikodinović-Runić, Jasmina
PY  - 2018
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/3263
PB  - Springer, New York
T2  - Applied Microbiology and Biotechnology
T1  - Supplementary data for the article: Spasic, J.; Mandic, M.; Djokic, L.; Nikodinovic-Runic, J. Streptomyces Spp. in the Biocatalysis Toolbox. Appl. Microbiol. Biotechnol. 2018, 102 (8), 3513–3536. https://doi.org/10.1007/s00253-018-8884-x
UR  - https://hdl.handle.net/21.15107/rcub_cherry_3263
ER  - 

@misc{
author = "Spasić, Jelena and Mandić, Mina and Đokić, Lidija and Nikodinović-Runić, Jasmina",
year = "2018",
publisher = "Springer, New York",
journal = "Applied Microbiology and Biotechnology",
title = "Supplementary data for the article: Spasic, J.; Mandic, M.; Djokic, L.; Nikodinovic-Runic, J. Streptomyces Spp. in the Biocatalysis Toolbox. Appl. Microbiol. Biotechnol. 2018, 102 (8), 3513–3536. https://doi.org/10.1007/s00253-018-8884-x",
url = "https://hdl.handle.net/21.15107/rcub_cherry_3263"
}

Spasić, J., Mandić, M., Đokić, L.,& Nikodinović-Runić, J.. (2018). Supplementary data for the article: Spasic, J.; Mandic, M.; Djokic, L.; Nikodinovic-Runic, J. Streptomyces Spp. in the Biocatalysis Toolbox. Appl. Microbiol. Biotechnol. 2018, 102 (8), 3513–3536. https://doi.org/10.1007/s00253-018-8884-x. in Applied Microbiology and Biotechnology
Springer, New York..
https://hdl.handle.net/21.15107/rcub_cherry_3263

Spasić J, Mandić M, Đokić L, Nikodinović-Runić J. Supplementary data for the article: Spasic, J.; Mandic, M.; Djokic, L.; Nikodinovic-Runic, J. Streptomyces Spp. in the Biocatalysis Toolbox. Appl. Microbiol. Biotechnol. 2018, 102 (8), 3513–3536. https://doi.org/10.1007/s00253-018-8884-x. in Applied Microbiology and Biotechnology. 2018;.
https://hdl.handle.net/21.15107/rcub_cherry_3263 .

Spasić, Jelena, Mandić, Mina, Đokić, Lidija, Nikodinović-Runić, Jasmina, "Supplementary data for the article: Spasic, J.; Mandic, M.; Djokic, L.; Nikodinovic-Runic, J. Streptomyces Spp. in the Biocatalysis Toolbox. Appl. Microbiol. Biotechnol. 2018, 102 (8), 3513–3536. https://doi.org/10.1007/s00253-018-8884-x" in Applied Microbiology and Biotechnology (2018),
https://hdl.handle.net/21.15107/rcub_cherry_3263 .

TY  - JOUR
AU  - Spasić, Jelena
AU  - Mandić, Mina
AU  - Đokić, Lidija
AU  - Nikodinović-Runić, Jasmina
PY  - 2018
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/2115
AB  - About 20,100 research publications dated 2000-2017 were recovered searching the PubMed and Web of Science databases for Streptomyces, which are the richest known source of bioactive molecules. However, these bacteria with versatile metabolism are powerful suppliers of biocatalytic tools (enzymes) for advanced biotechnological applications such as green chemical transformations and biopharmaceutical and biofuel production. The recent technological advances, especially in DNA sequencing coupled with computational tools for protein functional and structural prediction, and the improved access to microbial diversity enabled the easier access to enzymes and the ability to engineer them to suit a wider range of biotechnological processes. The major driver behind a dramatic increase in the utilization of biocatalysis is sustainable development and the shift toward bioeconomy that will, in accordance to the UN policy agenda "Bioeconomy to 2030," become a global effort in the near future. Streptomyces spp. already play a significant role among industrial microorganisms. The intention of this minireview is to highlight the presence of Streptomyces in the toolbox of biocatalysis and to give an overview of the most important advances in novel biocatalyst discovery and applications. Judging by the steady increase in a number of recent references (228 for the 2000-2017 period), it is clear that biocatalysts from Streptomyces spp. hold promises in terms of valuable properties and applicative industrial potential.
PB  - Springer, New York
T2  - Applied Microbiology and Biotechnology
T1  - Streptomyces spp. in the biocatalysis toolbox
VL  - 102
IS  - 8
SP  - 3513
EP  - 3536
DO  - 10.1007/s00253-018-8884-x
ER  - 

@article{
author = "Spasić, Jelena and Mandić, Mina and Đokić, Lidija and Nikodinović-Runić, Jasmina",
year = "2018",
abstract = "About 20,100 research publications dated 2000-2017 were recovered searching the PubMed and Web of Science databases for Streptomyces, which are the richest known source of bioactive molecules. However, these bacteria with versatile metabolism are powerful suppliers of biocatalytic tools (enzymes) for advanced biotechnological applications such as green chemical transformations and biopharmaceutical and biofuel production. The recent technological advances, especially in DNA sequencing coupled with computational tools for protein functional and structural prediction, and the improved access to microbial diversity enabled the easier access to enzymes and the ability to engineer them to suit a wider range of biotechnological processes. The major driver behind a dramatic increase in the utilization of biocatalysis is sustainable development and the shift toward bioeconomy that will, in accordance to the UN policy agenda "Bioeconomy to 2030," become a global effort in the near future. Streptomyces spp. already play a significant role among industrial microorganisms. The intention of this minireview is to highlight the presence of Streptomyces in the toolbox of biocatalysis and to give an overview of the most important advances in novel biocatalyst discovery and applications. Judging by the steady increase in a number of recent references (228 for the 2000-2017 period), it is clear that biocatalysts from Streptomyces spp. hold promises in terms of valuable properties and applicative industrial potential.",
publisher = "Springer, New York",
journal = "Applied Microbiology and Biotechnology",
title = "Streptomyces spp. in the biocatalysis toolbox",
volume = "102",
number = "8",
pages = "3513-3536",
doi = "10.1007/s00253-018-8884-x"
}

Spasić, J., Mandić, M., Đokić, L.,& Nikodinović-Runić, J.. (2018). Streptomyces spp. in the biocatalysis toolbox. in Applied Microbiology and Biotechnology
Springer, New York., 102(8), 3513-3536.
https://doi.org/10.1007/s00253-018-8884-x

Spasić J, Mandić M, Đokić L, Nikodinović-Runić J. Streptomyces spp. in the biocatalysis toolbox. in Applied Microbiology and Biotechnology. 2018;102(8):3513-3536.
doi:10.1007/s00253-018-8884-x .

Spasić, Jelena, Mandić, Mina, Đokić, Lidija, Nikodinović-Runić, Jasmina, "Streptomyces spp. in the biocatalysis toolbox" in Applied Microbiology and Biotechnology, 102, no. 8 (2018):3513-3536,
https://doi.org/10.1007/s00253-018-8884-x . .

TY  - DATA
AU  - Jeremić, Sanja
AU  - Beškoski, Vladimir
AU  - Đokić, Lidija
AU  - Vasiljević, Branka
AU  - Vrvić, Miroslav M.
AU  - Avdalović, Jelena
AU  - Gojgić-Cvijović, Gordana D.
AU  - Slavković-Beškoski, Latinka
AU  - Nikodinović-Runić, Jasmina
PY  - 2016
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/3546
PB  - Academic Press Ltd- Elsevier Science Ltd, London
T2  - Journal of Environmental Management
T1  - Supplementary material for the article: Jeremic, S.; Beškoski, V. P.; Djokic, L.; Vasiljevic, B.; Vrvić, M. M.; Avdalović, J.; Gojgić Cvijović, G.; Beškoski, L. S.; Nikodinovic-Runic, J. Interactions of the Metal Tolerant Heterotrophic Microorganisms and Iron Oxidizing Autotrophic Bacteria from Sulphidic Mine Environment during Bioleaching Experiments. Journal of Environmental Management 2016, 172, 151–161. https://doi.org/10.1016/j.jenvman.2016.02.041
UR  - https://hdl.handle.net/21.15107/rcub_cherry_3546
ER  - 

@misc{
author = "Jeremić, Sanja and Beškoski, Vladimir and Đokić, Lidija and Vasiljević, Branka and Vrvić, Miroslav M. and Avdalović, Jelena and Gojgić-Cvijović, Gordana D. and Slavković-Beškoski, Latinka and Nikodinović-Runić, Jasmina",
year = "2016",
publisher = "Academic Press Ltd- Elsevier Science Ltd, London",
journal = "Journal of Environmental Management",
title = "Supplementary material for the article: Jeremic, S.; Beškoski, V. P.; Djokic, L.; Vasiljevic, B.; Vrvić, M. M.; Avdalović, J.; Gojgić Cvijović, G.; Beškoski, L. S.; Nikodinovic-Runic, J. Interactions of the Metal Tolerant Heterotrophic Microorganisms and Iron Oxidizing Autotrophic Bacteria from Sulphidic Mine Environment during Bioleaching Experiments. Journal of Environmental Management 2016, 172, 151–161. https://doi.org/10.1016/j.jenvman.2016.02.041",
url = "https://hdl.handle.net/21.15107/rcub_cherry_3546"
}

Jeremić, S., Beškoski, V., Đokić, L., Vasiljević, B., Vrvić, M. M., Avdalović, J., Gojgić-Cvijović, G. D., Slavković-Beškoski, L.,& Nikodinović-Runić, J.. (2016). Supplementary material for the article: Jeremic, S.; Beškoski, V. P.; Djokic, L.; Vasiljevic, B.; Vrvić, M. M.; Avdalović, J.; Gojgić Cvijović, G.; Beškoski, L. S.; Nikodinovic-Runic, J. Interactions of the Metal Tolerant Heterotrophic Microorganisms and Iron Oxidizing Autotrophic Bacteria from Sulphidic Mine Environment during Bioleaching Experiments. Journal of Environmental Management 2016, 172, 151–161. https://doi.org/10.1016/j.jenvman.2016.02.041. in Journal of Environmental Management
Academic Press Ltd- Elsevier Science Ltd, London..
https://hdl.handle.net/21.15107/rcub_cherry_3546

Jeremić S, Beškoski V, Đokić L, Vasiljević B, Vrvić MM, Avdalović J, Gojgić-Cvijović GD, Slavković-Beškoski L, Nikodinović-Runić J. Supplementary material for the article: Jeremic, S.; Beškoski, V. P.; Djokic, L.; Vasiljevic, B.; Vrvić, M. M.; Avdalović, J.; Gojgić Cvijović, G.; Beškoski, L. S.; Nikodinovic-Runic, J. Interactions of the Metal Tolerant Heterotrophic Microorganisms and Iron Oxidizing Autotrophic Bacteria from Sulphidic Mine Environment during Bioleaching Experiments. Journal of Environmental Management 2016, 172, 151–161. https://doi.org/10.1016/j.jenvman.2016.02.041. in Journal of Environmental Management. 2016;.
https://hdl.handle.net/21.15107/rcub_cherry_3546 .

Jeremić, Sanja, Beškoski, Vladimir, Đokić, Lidija, Vasiljević, Branka, Vrvić, Miroslav M., Avdalović, Jelena, Gojgić-Cvijović, Gordana D., Slavković-Beškoski, Latinka, Nikodinović-Runić, Jasmina, "Supplementary material for the article: Jeremic, S.; Beškoski, V. P.; Djokic, L.; Vasiljevic, B.; Vrvić, M. M.; Avdalović, J.; Gojgić Cvijović, G.; Beškoski, L. S.; Nikodinovic-Runic, J. Interactions of the Metal Tolerant Heterotrophic Microorganisms and Iron Oxidizing Autotrophic Bacteria from Sulphidic Mine Environment during Bioleaching Experiments. Journal of Environmental Management 2016, 172, 151–161. https://doi.org/10.1016/j.jenvman.2016.02.041" in Journal of Environmental Management (2016),
https://hdl.handle.net/21.15107/rcub_cherry_3546 .

TY  - JOUR
AU  - Jeremić, Sanja
AU  - Beškoski, Vladimir
AU  - Đokić, Lidija
AU  - Vasiljević, Branka
AU  - Vrvić, Miroslav M.
AU  - Avdalović, Jelena
AU  - Gojgić-Cvijović, Gordana D.
AU  - Slavković-Beškoski, Latinka
AU  - Nikodinović-Runić, Jasmina
PY  - 2016
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1915
AB  - Iron and sulfur oxidizing chemolithoautotrophic acidophilic bacteria, such as Acidithiobacillus species, hold the dominant role in mine environments characterized by low pH values and high concentrations of reduced sulfur and iron compounds, such as ores, rocks and acid drainage waters from mines. On the other hand, heterotrophic microorganisms, especially their biofilms, from these specific niches are receiving increased attention, but their potential eco-physiological roles have not been fully understood. Biofilms are considered a threat to human health, but biofilms also have beneficial properties as they are deployed in waste recycling and bioremediation systems. We have analyzed interactions of the metal tolerant heterotrophic microorganisms in biofilms with iron oxidizing autotrophic bacteria both from the sulphidic mine environment (copper mine Bor, Serbia). High tolerance to Cu2+, Cd2+ and Cr6+ and the presence of genetic determinants for the respective metal tolerance and biofilm-forming ability was shown for indigenous heterotrophic bacteria that included strains of Staphylococcus and Rhodococcus. Two well characterized bacteria-Pseudomonas aeruginosa PAO1 (known biofilm former) and Cupriavidus metallidurans CH34 (known metal resistant representative) were also included in the study. The interaction and survivability of autotrophic iron oxidizing Acidithiobacillus bacteria and biofilms of heterotrophic bacteria during co-cultivation was revealed. Finally, the effect of heterotrophic biofilms on bioleaching process with indigenous iron oxidizing Acidithiobacillus species was shown not to be inhibitory under in vitro conditions. (C) 2016 Elsevier Ltd. All rights reserved.
PB  - Academic Press Ltd- Elsevier Science Ltd, London
T2  - Journal of Environmental Management
T1  - Interactions of the metal tolerant heterotrophic microorganisms and iron oxidizing autotrophic bacteria from sulphidic mine environment during bioleaching experiments
VL  - 172
SP  - 151
EP  - 161
DO  - 10.1016/j.jenvman.2016.02.041
ER  - 

@article{
author = "Jeremić, Sanja and Beškoski, Vladimir and Đokić, Lidija and Vasiljević, Branka and Vrvić, Miroslav M. and Avdalović, Jelena and Gojgić-Cvijović, Gordana D. and Slavković-Beškoski, Latinka and Nikodinović-Runić, Jasmina",
year = "2016",
abstract = "Iron and sulfur oxidizing chemolithoautotrophic acidophilic bacteria, such as Acidithiobacillus species, hold the dominant role in mine environments characterized by low pH values and high concentrations of reduced sulfur and iron compounds, such as ores, rocks and acid drainage waters from mines. On the other hand, heterotrophic microorganisms, especially their biofilms, from these specific niches are receiving increased attention, but their potential eco-physiological roles have not been fully understood. Biofilms are considered a threat to human health, but biofilms also have beneficial properties as they are deployed in waste recycling and bioremediation systems. We have analyzed interactions of the metal tolerant heterotrophic microorganisms in biofilms with iron oxidizing autotrophic bacteria both from the sulphidic mine environment (copper mine Bor, Serbia). High tolerance to Cu2+, Cd2+ and Cr6+ and the presence of genetic determinants for the respective metal tolerance and biofilm-forming ability was shown for indigenous heterotrophic bacteria that included strains of Staphylococcus and Rhodococcus. Two well characterized bacteria-Pseudomonas aeruginosa PAO1 (known biofilm former) and Cupriavidus metallidurans CH34 (known metal resistant representative) were also included in the study. The interaction and survivability of autotrophic iron oxidizing Acidithiobacillus bacteria and biofilms of heterotrophic bacteria during co-cultivation was revealed. Finally, the effect of heterotrophic biofilms on bioleaching process with indigenous iron oxidizing Acidithiobacillus species was shown not to be inhibitory under in vitro conditions. (C) 2016 Elsevier Ltd. All rights reserved.",
publisher = "Academic Press Ltd- Elsevier Science Ltd, London",
journal = "Journal of Environmental Management",
title = "Interactions of the metal tolerant heterotrophic microorganisms and iron oxidizing autotrophic bacteria from sulphidic mine environment during bioleaching experiments",
volume = "172",
pages = "151-161",
doi = "10.1016/j.jenvman.2016.02.041"
}

Jeremić, S., Beškoski, V., Đokić, L., Vasiljević, B., Vrvić, M. M., Avdalović, J., Gojgić-Cvijović, G. D., Slavković-Beškoski, L.,& Nikodinović-Runić, J.. (2016). Interactions of the metal tolerant heterotrophic microorganisms and iron oxidizing autotrophic bacteria from sulphidic mine environment during bioleaching experiments. in Journal of Environmental Management
Academic Press Ltd- Elsevier Science Ltd, London., 172, 151-161.
https://doi.org/10.1016/j.jenvman.2016.02.041

Jeremić S, Beškoski V, Đokić L, Vasiljević B, Vrvić MM, Avdalović J, Gojgić-Cvijović GD, Slavković-Beškoski L, Nikodinović-Runić J. Interactions of the metal tolerant heterotrophic microorganisms and iron oxidizing autotrophic bacteria from sulphidic mine environment during bioleaching experiments. in Journal of Environmental Management. 2016;172:151-161.
doi:10.1016/j.jenvman.2016.02.041 .

Jeremić, Sanja, Beškoski, Vladimir, Đokić, Lidija, Vasiljević, Branka, Vrvić, Miroslav M., Avdalović, Jelena, Gojgić-Cvijović, Gordana D., Slavković-Beškoski, Latinka, Nikodinović-Runić, Jasmina, "Interactions of the metal tolerant heterotrophic microorganisms and iron oxidizing autotrophic bacteria from sulphidic mine environment during bioleaching experiments" in Journal of Environmental Management, 172 (2016):151-161,
https://doi.org/10.1016/j.jenvman.2016.02.041 . .

TY  - JOUR
AU  - Lazić, Jelena O.
AU  - Spasić, Jelena
AU  - Francuski, Đorđe
AU  - Tokić-Vujošević, Zorana
AU  - Nikodinović-Runić, Jasmina
AU  - Maslak, Veselin
AU  - Đokić, Lidija
PY  - 2016
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/2324
AB  - Michael addition of aldehydes to nitro-olefins is an effective method to obtain useful chiral gamma-nitroaldehydes. gamma-Nitroaldehydes are precursors for chiral gamma-aminobutyric acid analogues, which have numerous pharmacological activities and are used for the treatment of neurological disorders. A whole-cell system based on recombinantly expressed 4-oxalocrotonate tautomerase (4-OT) was developed and shown to be an effective biocatalyst for the Michael addition of branched aldehydes to beta-nitrostyrenes. The aim of this study was to investigate the influence of the substitution of the N-terminal proline with lysine and arginine, both containing a reactive epsilon-amino group, on the Michael addition catalyzed by 4-OT. First, the effects of these mutations were examined by in silico analysis, followed by the generation of three terminal lysine mutants. The generated mutants, 4-OT_K, 4-OT_PK and 4-OT_KK were tested for their ability to utilise beta-nitrostyrene (1), (E)-1-nitro-2-(2-thienyl)ethene (2) and trans-p-chloro-beta-nitrostyrene (3) as Michael acceptors with isobutanal (2-methylpropanal) as the donor. For comparison, the lithium salt of lysine was used in the same organocatalytic reactions. In general, the introduction of lysine had a negative effect on Michael additions based on overall product yields. However, additional lysine residues at the N-terminus of the protein resulted in structural changes that enhanced the activity towards 2 and 3. Therefore, the N-terminal proline is important for 4-OT-catalysed Michael-additions, but it is not essential.
PB  - Serbian Chemical Soc, Belgrade
T2  - Journal of the Serbian Chemical Society
T1  - Importance of N-terminal proline for the promiscuous activity of 4-oxalocrotonate tautomerase (4-OT)
VL  - 81
IS  - 8
SP  - 871
EP  - 881
DO  - 10.2298/JSC160222053L
ER  - 

@article{
author = "Lazić, Jelena O. and Spasić, Jelena and Francuski, Đorđe and Tokić-Vujošević, Zorana and Nikodinović-Runić, Jasmina and Maslak, Veselin and Đokić, Lidija",
year = "2016",
abstract = "Michael addition of aldehydes to nitro-olefins is an effective method to obtain useful chiral gamma-nitroaldehydes. gamma-Nitroaldehydes are precursors for chiral gamma-aminobutyric acid analogues, which have numerous pharmacological activities and are used for the treatment of neurological disorders. A whole-cell system based on recombinantly expressed 4-oxalocrotonate tautomerase (4-OT) was developed and shown to be an effective biocatalyst for the Michael addition of branched aldehydes to beta-nitrostyrenes. The aim of this study was to investigate the influence of the substitution of the N-terminal proline with lysine and arginine, both containing a reactive epsilon-amino group, on the Michael addition catalyzed by 4-OT. First, the effects of these mutations were examined by in silico analysis, followed by the generation of three terminal lysine mutants. The generated mutants, 4-OT_K, 4-OT_PK and 4-OT_KK were tested for their ability to utilise beta-nitrostyrene (1), (E)-1-nitro-2-(2-thienyl)ethene (2) and trans-p-chloro-beta-nitrostyrene (3) as Michael acceptors with isobutanal (2-methylpropanal) as the donor. For comparison, the lithium salt of lysine was used in the same organocatalytic reactions. In general, the introduction of lysine had a negative effect on Michael additions based on overall product yields. However, additional lysine residues at the N-terminus of the protein resulted in structural changes that enhanced the activity towards 2 and 3. Therefore, the N-terminal proline is important for 4-OT-catalysed Michael-additions, but it is not essential.",
publisher = "Serbian Chemical Soc, Belgrade",
journal = "Journal of the Serbian Chemical Society",
title = "Importance of N-terminal proline for the promiscuous activity of 4-oxalocrotonate tautomerase (4-OT)",
volume = "81",
number = "8",
pages = "871-881",
doi = "10.2298/JSC160222053L"
}

Lazić, J. O., Spasić, J., Francuski, Đ., Tokić-Vujošević, Z., Nikodinović-Runić, J., Maslak, V.,& Đokić, L.. (2016). Importance of N-terminal proline for the promiscuous activity of 4-oxalocrotonate tautomerase (4-OT). in Journal of the Serbian Chemical Society
Serbian Chemical Soc, Belgrade., 81(8), 871-881.
https://doi.org/10.2298/JSC160222053L

Lazić JO, Spasić J, Francuski Đ, Tokić-Vujošević Z, Nikodinović-Runić J, Maslak V, Đokić L. Importance of N-terminal proline for the promiscuous activity of 4-oxalocrotonate tautomerase (4-OT). in Journal of the Serbian Chemical Society. 2016;81(8):871-881.
doi:10.2298/JSC160222053L .

Lazić, Jelena O., Spasić, Jelena, Francuski, Đorđe, Tokić-Vujošević, Zorana, Nikodinović-Runić, Jasmina, Maslak, Veselin, Đokić, Lidija, "Importance of N-terminal proline for the promiscuous activity of 4-oxalocrotonate tautomerase (4-OT)" in Journal of the Serbian Chemical Society, 81, no. 8 (2016):871-881,
https://doi.org/10.2298/JSC160222053L . .

TY  - JOUR
AU  - Glišić, Biljana Đ.
AU  - Savić, Nada D.
AU  - Warżajtis, Beata
AU  - Đokić, Lidija
AU  - Ilić-Tomić, Tatjana
AU  - Antić, Marija
AU  - Radenković, Slavko
AU  - Nikodinović-Runić, Jasmina
AU  - Rychlewska, Urszula
AU  - Đuran, Miloš I.
PY  - 2016
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/2275
AB  - Dinuclear gold(III) complexes {[AuCl3](2)(mu-4,4'-bipy)} (1) and {[AuCl3](2)(mu-bpe)} (2) with bridging aromatic nitrogen-containing heterocyclic ligands, 4,4'-bipyridine (4,4'-bipy) and 1,2-bis(4-pyridyl)ethane (bpe), were synthesized and characterized by NMR (H-1 and C-13), UV-vis and IR spectroscopic techniques. The crystal structure of 1 was determined by single-crystal X-ray diffraction analysis, while the DFT M06-2X method was applied in order to optimize the structures of 1 and 2. A detailed mechanistic study was performed using the same DFT approach in order to shed light on the disparate coordination modes of the presently investigated N-heterocyclic ligands and the monocyclic pyrazine, which contains two nitrogen atoms within one ring, toward the AuCl3 fragment. The investigation of the solution stability of 1 and 2 in DMSO revealed that both complexes were sufficiently stable in this solvent at room temperature. Complexes 1 and 2, along with K[AuCl4] and the N-heterocyclic ligands used for their synthesis, were evaluated by in vitro antimicrobial studies against a panel of Gram-positive and Gram-negative bacteria and the fungus Candida albicans. In most cases, complexes 1 and 2 have higher antibacterial activity than K[AuCl4] (MICs for 1 and 2 were in the range 3.9-62.5 mu g mL(-1)), while both of the N-heterocycles did not affect the bacterial growth at concentrations up to 500 mu g mL(-1). On the other hand, the antifungal activity of these two complexes against C. albicans was moderate and lower than that of K[AuCl4]. In order to determine the therapeutic potential of 1 and 2, their antiproliferative effect on the normal human lung fibroblast cell line MRC5 and embryotoxicity on zebrafish (Danio rerio) have also been evaluated. To the best of our knowledge, complexes 1 and 2 are the first examples of dinuclear gold(III) complexes with aromatic six-membered heterocycles containing two nitrogen atoms as bridging ligands.
PB  - Royal Soc Chemistry, Cambridge
T2  - MedChemComm
T1  - Synthesis, structural characterization and biological evaluation of dinuclear gold(III) complexes with aromatic nitrogen-containing ligands: antimicrobial activity in relation to the complex nuclearity
VL  - 7
IS  - 7
SP  - 1356
EP  - 1366
DO  - 10.1039/c6md00214e
ER  - 

@article{
author = "Glišić, Biljana Đ. and Savić, Nada D. and Warżajtis, Beata and Đokić, Lidija and Ilić-Tomić, Tatjana and Antić, Marija and Radenković, Slavko and Nikodinović-Runić, Jasmina and Rychlewska, Urszula and Đuran, Miloš I.",
year = "2016",
abstract = "Dinuclear gold(III) complexes {[AuCl3](2)(mu-4,4'-bipy)} (1) and {[AuCl3](2)(mu-bpe)} (2) with bridging aromatic nitrogen-containing heterocyclic ligands, 4,4'-bipyridine (4,4'-bipy) and 1,2-bis(4-pyridyl)ethane (bpe), were synthesized and characterized by NMR (H-1 and C-13), UV-vis and IR spectroscopic techniques. The crystal structure of 1 was determined by single-crystal X-ray diffraction analysis, while the DFT M06-2X method was applied in order to optimize the structures of 1 and 2. A detailed mechanistic study was performed using the same DFT approach in order to shed light on the disparate coordination modes of the presently investigated N-heterocyclic ligands and the monocyclic pyrazine, which contains two nitrogen atoms within one ring, toward the AuCl3 fragment. The investigation of the solution stability of 1 and 2 in DMSO revealed that both complexes were sufficiently stable in this solvent at room temperature. Complexes 1 and 2, along with K[AuCl4] and the N-heterocyclic ligands used for their synthesis, were evaluated by in vitro antimicrobial studies against a panel of Gram-positive and Gram-negative bacteria and the fungus Candida albicans. In most cases, complexes 1 and 2 have higher antibacterial activity than K[AuCl4] (MICs for 1 and 2 were in the range 3.9-62.5 mu g mL(-1)), while both of the N-heterocycles did not affect the bacterial growth at concentrations up to 500 mu g mL(-1). On the other hand, the antifungal activity of these two complexes against C. albicans was moderate and lower than that of K[AuCl4]. In order to determine the therapeutic potential of 1 and 2, their antiproliferative effect on the normal human lung fibroblast cell line MRC5 and embryotoxicity on zebrafish (Danio rerio) have also been evaluated. To the best of our knowledge, complexes 1 and 2 are the first examples of dinuclear gold(III) complexes with aromatic six-membered heterocycles containing two nitrogen atoms as bridging ligands.",
publisher = "Royal Soc Chemistry, Cambridge",
journal = "MedChemComm",
title = "Synthesis, structural characterization and biological evaluation of dinuclear gold(III) complexes with aromatic nitrogen-containing ligands: antimicrobial activity in relation to the complex nuclearity",
volume = "7",
number = "7",
pages = "1356-1366",
doi = "10.1039/c6md00214e"
}

Glišić, B. Đ., Savić, N. D., Warżajtis, B., Đokić, L., Ilić-Tomić, T., Antić, M., Radenković, S., Nikodinović-Runić, J., Rychlewska, U.,& Đuran, M. I.. (2016). Synthesis, structural characterization and biological evaluation of dinuclear gold(III) complexes with aromatic nitrogen-containing ligands: antimicrobial activity in relation to the complex nuclearity. in MedChemComm
Royal Soc Chemistry, Cambridge., 7(7), 1356-1366.
https://doi.org/10.1039/c6md00214e

Glišić BĐ, Savić ND, Warżajtis B, Đokić L, Ilić-Tomić T, Antić M, Radenković S, Nikodinović-Runić J, Rychlewska U, Đuran MI. Synthesis, structural characterization and biological evaluation of dinuclear gold(III) complexes with aromatic nitrogen-containing ligands: antimicrobial activity in relation to the complex nuclearity. in MedChemComm. 2016;7(7):1356-1366.
doi:10.1039/c6md00214e .

Glišić, Biljana Đ., Savić, Nada D., Warżajtis, Beata, Đokić, Lidija, Ilić-Tomić, Tatjana, Antić, Marija, Radenković, Slavko, Nikodinović-Runić, Jasmina, Rychlewska, Urszula, Đuran, Miloš I., "Synthesis, structural characterization and biological evaluation of dinuclear gold(III) complexes with aromatic nitrogen-containing ligands: antimicrobial activity in relation to the complex nuclearity" in MedChemComm, 7, no. 7 (2016):1356-1366,
https://doi.org/10.1039/c6md00214e . .

TY  - DATA
AU  - Đokić, Lidija
AU  - Spasić, Jelena
AU  - Jeremić, Sanja
AU  - Vasiljević, Branka
AU  - Prodanović, Olivera
AU  - Prodanović, Radivoje
AU  - Nikodinović-Runić, Jasmina
PY  - 2015
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/3377
PB  - Springer, New York
T2  - Bioprocess and Biosystems Engineering
T1  - Supplementary data for article: Djokic, L.; Spasic, J.; Jeremic, S.; Vasiljevic, B.; Prodanovic, O.; Prodanovic, R.; Nikodinovic-Runic, J. Immobilization of Escherichia Coli Cells Expressing 4-Oxalocrotonate Tautomerase for Improved Biotransformation of β-Nitrostyrene. Bioprocess and biosystems engineering 2015, 38 (12), 2389–2395. https://doi.org/10.1007/s00449-015-1474-8
UR  - https://hdl.handle.net/21.15107/rcub_cherry_3377
ER  - 

@misc{
author = "Đokić, Lidija and Spasić, Jelena and Jeremić, Sanja and Vasiljević, Branka and Prodanović, Olivera and Prodanović, Radivoje and Nikodinović-Runić, Jasmina",
year = "2015",
publisher = "Springer, New York",
journal = "Bioprocess and Biosystems Engineering",
title = "Supplementary data for article: Djokic, L.; Spasic, J.; Jeremic, S.; Vasiljevic, B.; Prodanovic, O.; Prodanovic, R.; Nikodinovic-Runic, J. Immobilization of Escherichia Coli Cells Expressing 4-Oxalocrotonate Tautomerase for Improved Biotransformation of β-Nitrostyrene. Bioprocess and biosystems engineering 2015, 38 (12), 2389–2395. https://doi.org/10.1007/s00449-015-1474-8",
url = "https://hdl.handle.net/21.15107/rcub_cherry_3377"
}

Đokić, L., Spasić, J., Jeremić, S., Vasiljević, B., Prodanović, O., Prodanović, R.,& Nikodinović-Runić, J.. (2015). Supplementary data for article: Djokic, L.; Spasic, J.; Jeremic, S.; Vasiljevic, B.; Prodanovic, O.; Prodanovic, R.; Nikodinovic-Runic, J. Immobilization of Escherichia Coli Cells Expressing 4-Oxalocrotonate Tautomerase for Improved Biotransformation of β-Nitrostyrene. Bioprocess and biosystems engineering 2015, 38 (12), 2389–2395. https://doi.org/10.1007/s00449-015-1474-8. in Bioprocess and Biosystems Engineering
Springer, New York..
https://hdl.handle.net/21.15107/rcub_cherry_3377

Đokić L, Spasić J, Jeremić S, Vasiljević B, Prodanović O, Prodanović R, Nikodinović-Runić J. Supplementary data for article: Djokic, L.; Spasic, J.; Jeremic, S.; Vasiljevic, B.; Prodanovic, O.; Prodanovic, R.; Nikodinovic-Runic, J. Immobilization of Escherichia Coli Cells Expressing 4-Oxalocrotonate Tautomerase for Improved Biotransformation of β-Nitrostyrene. Bioprocess and biosystems engineering 2015, 38 (12), 2389–2395. https://doi.org/10.1007/s00449-015-1474-8. in Bioprocess and Biosystems Engineering. 2015;.
https://hdl.handle.net/21.15107/rcub_cherry_3377 .

Đokić, Lidija, Spasić, Jelena, Jeremić, Sanja, Vasiljević, Branka, Prodanović, Olivera, Prodanović, Radivoje, Nikodinović-Runić, Jasmina, "Supplementary data for article: Djokic, L.; Spasic, J.; Jeremic, S.; Vasiljevic, B.; Prodanovic, O.; Prodanovic, R.; Nikodinovic-Runic, J. Immobilization of Escherichia Coli Cells Expressing 4-Oxalocrotonate Tautomerase for Improved Biotransformation of β-Nitrostyrene. Bioprocess and biosystems engineering 2015, 38 (12), 2389–2395. https://doi.org/10.1007/s00449-015-1474-8" in Bioprocess and Biosystems Engineering (2015),
https://hdl.handle.net/21.15107/rcub_cherry_3377 .

TY  - DATA
AU  - Ilić-Tomić, Tatjana
AU  - Genčić, Marija S.
AU  - Živković, Miodrag V.
AU  - Vasiljević, Branka
AU  - Đokić, Lidija
AU  - Nikodinović-Runić, Jasmina
AU  - Radulović, Niko S.
PY  - 2015
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/3430
PB  - Springer, New York
T2  - Applied Microbiology and Biotechnology
T1  - Supplementary data for article: Ilic-Tomic, T.; Genčić, M. S.; Živković, M. Z.; Vasiljevic, B.; Djokic, L.; Nikodinovic-Runic, J.; Radulović, N. S. Structural Diversity and Possible Functional Roles of Free Fatty Acids of the Novel Soil Isolate Streptomyces Sp. NP10. Applied Microbiology and Biotechnology 2015, 99 (11), 4815–4833. https://doi.org/10.1007/s00253-014-6364-5
UR  - https://hdl.handle.net/21.15107/rcub_cherry_3430
ER  - 

@misc{
author = "Ilić-Tomić, Tatjana and Genčić, Marija S. and Živković, Miodrag V. and Vasiljević, Branka and Đokić, Lidija and Nikodinović-Runić, Jasmina and Radulović, Niko S.",
year = "2015",
publisher = "Springer, New York",
journal = "Applied Microbiology and Biotechnology",
title = "Supplementary data for article: Ilic-Tomic, T.; Genčić, M. S.; Živković, M. Z.; Vasiljevic, B.; Djokic, L.; Nikodinovic-Runic, J.; Radulović, N. S. Structural Diversity and Possible Functional Roles of Free Fatty Acids of the Novel Soil Isolate Streptomyces Sp. NP10. Applied Microbiology and Biotechnology 2015, 99 (11), 4815–4833. https://doi.org/10.1007/s00253-014-6364-5",
url = "https://hdl.handle.net/21.15107/rcub_cherry_3430"
}

Ilić-Tomić, T., Genčić, M. S., Živković, M. V., Vasiljević, B., Đokić, L., Nikodinović-Runić, J.,& Radulović, N. S.. (2015). Supplementary data for article: Ilic-Tomic, T.; Genčić, M. S.; Živković, M. Z.; Vasiljevic, B.; Djokic, L.; Nikodinovic-Runic, J.; Radulović, N. S. Structural Diversity and Possible Functional Roles of Free Fatty Acids of the Novel Soil Isolate Streptomyces Sp. NP10. Applied Microbiology and Biotechnology 2015, 99 (11), 4815–4833. https://doi.org/10.1007/s00253-014-6364-5. in Applied Microbiology and Biotechnology
Springer, New York..
https://hdl.handle.net/21.15107/rcub_cherry_3430

Ilić-Tomić T, Genčić MS, Živković MV, Vasiljević B, Đokić L, Nikodinović-Runić J, Radulović NS. Supplementary data for article: Ilic-Tomic, T.; Genčić, M. S.; Živković, M. Z.; Vasiljevic, B.; Djokic, L.; Nikodinovic-Runic, J.; Radulović, N. S. Structural Diversity and Possible Functional Roles of Free Fatty Acids of the Novel Soil Isolate Streptomyces Sp. NP10. Applied Microbiology and Biotechnology 2015, 99 (11), 4815–4833. https://doi.org/10.1007/s00253-014-6364-5. in Applied Microbiology and Biotechnology. 2015;.
https://hdl.handle.net/21.15107/rcub_cherry_3430 .

Ilić-Tomić, Tatjana, Genčić, Marija S., Živković, Miodrag V., Vasiljević, Branka, Đokić, Lidija, Nikodinović-Runić, Jasmina, Radulović, Niko S., "Supplementary data for article: Ilic-Tomic, T.; Genčić, M. S.; Živković, M. Z.; Vasiljevic, B.; Djokic, L.; Nikodinovic-Runic, J.; Radulović, N. S. Structural Diversity and Possible Functional Roles of Free Fatty Acids of the Novel Soil Isolate Streptomyces Sp. NP10. Applied Microbiology and Biotechnology 2015, 99 (11), 4815–4833. https://doi.org/10.1007/s00253-014-6364-5" in Applied Microbiology and Biotechnology (2015),
https://hdl.handle.net/21.15107/rcub_cherry_3430 .

TY  - JOUR
AU  - Ilić-Tomić, Tatjana
AU  - Genčić, Marija S.
AU  - Živković, Miodrag V.
AU  - Vasiljević, Branka
AU  - Đokić, Lidija
AU  - Nikodinović-Runić, Jasmina
AU  - Radulović, Niko S.
PY  - 2015
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1713
AB  - Herein, a novel soil bacterium Streptomyces sp. NP10 able to grow outside usual streptomycetes optimum conditions (e.g., at 4 A degrees C, pH 9 and high NaCl concentration), exhibiting atypical hemolytic, DNAse, and cellulolytic activities, is described. This strain produces and excretes into the growth medium large amounts of free long-chain fatty acids (FAs). A concurrent lipidomics study revealed a large structural diversity of FAs with over 50 different n- and branched-chain, (un)saturated, and cyclopropane FAs (C-7-C-30) produced by this strain. Two of these, i-17:0cy9-10 and a-18:0cy9-10, represent new natural products and the first ever identified branched cyclopropane FAs. Both free and bound lipid profiles of Streptomyces sp. NP10 were dominated by saturated branched chain FAs (i-14:0, a-15:0, and i-16:0). Although these free FAs showed only a moderate antimicrobial activity, our results suggest that they could have an ecophysiological role in interspecies signaling with another soil microorganism Pseudomonas aeruginosa. This work represents the first comprehensive report on the structural diversity and complexity of the free FA pool in Streptomyces. A naturally occurring streptomycete, such as Streptomyces sp. NP10, which secretes significant amounts of free long-chain FAs (non-cytotoxic) into the medium, could be useful in microbial biodiesel production.
PB  - Springer, New York
T2  - Applied Microbiology and Biotechnology
T1  - Structural diversity and possible functional roles of free fatty acids of the novel soil isolate Streptomyces sp NP10
VL  - 99
IS  - 11
SP  - 4815
EP  - 4833
DO  - 10.1007/s00253-014-6364-5
ER  - 

@article{
author = "Ilić-Tomić, Tatjana and Genčić, Marija S. and Živković, Miodrag V. and Vasiljević, Branka and Đokić, Lidija and Nikodinović-Runić, Jasmina and Radulović, Niko S.",
year = "2015",
abstract = "Herein, a novel soil bacterium Streptomyces sp. NP10 able to grow outside usual streptomycetes optimum conditions (e.g., at 4 A degrees C, pH 9 and high NaCl concentration), exhibiting atypical hemolytic, DNAse, and cellulolytic activities, is described. This strain produces and excretes into the growth medium large amounts of free long-chain fatty acids (FAs). A concurrent lipidomics study revealed a large structural diversity of FAs with over 50 different n- and branched-chain, (un)saturated, and cyclopropane FAs (C-7-C-30) produced by this strain. Two of these, i-17:0cy9-10 and a-18:0cy9-10, represent new natural products and the first ever identified branched cyclopropane FAs. Both free and bound lipid profiles of Streptomyces sp. NP10 were dominated by saturated branched chain FAs (i-14:0, a-15:0, and i-16:0). Although these free FAs showed only a moderate antimicrobial activity, our results suggest that they could have an ecophysiological role in interspecies signaling with another soil microorganism Pseudomonas aeruginosa. This work represents the first comprehensive report on the structural diversity and complexity of the free FA pool in Streptomyces. A naturally occurring streptomycete, such as Streptomyces sp. NP10, which secretes significant amounts of free long-chain FAs (non-cytotoxic) into the medium, could be useful in microbial biodiesel production.",
publisher = "Springer, New York",
journal = "Applied Microbiology and Biotechnology",
title = "Structural diversity and possible functional roles of free fatty acids of the novel soil isolate Streptomyces sp NP10",
volume = "99",
number = "11",
pages = "4815-4833",
doi = "10.1007/s00253-014-6364-5"
}

Ilić-Tomić, T., Genčić, M. S., Živković, M. V., Vasiljević, B., Đokić, L., Nikodinović-Runić, J.,& Radulović, N. S.. (2015). Structural diversity and possible functional roles of free fatty acids of the novel soil isolate Streptomyces sp NP10. in Applied Microbiology and Biotechnology
Springer, New York., 99(11), 4815-4833.
https://doi.org/10.1007/s00253-014-6364-5

Ilić-Tomić T, Genčić MS, Živković MV, Vasiljević B, Đokić L, Nikodinović-Runić J, Radulović NS. Structural diversity and possible functional roles of free fatty acids of the novel soil isolate Streptomyces sp NP10. in Applied Microbiology and Biotechnology. 2015;99(11):4815-4833.
doi:10.1007/s00253-014-6364-5 .

Ilić-Tomić, Tatjana, Genčić, Marija S., Živković, Miodrag V., Vasiljević, Branka, Đokić, Lidija, Nikodinović-Runić, Jasmina, Radulović, Niko S., "Structural diversity and possible functional roles of free fatty acids of the novel soil isolate Streptomyces sp NP10" in Applied Microbiology and Biotechnology, 99, no. 11 (2015):4815-4833,
https://doi.org/10.1007/s00253-014-6364-5 . .

TY  - JOUR
AU  - Đokić, Lidija
AU  - Spasić, Jelena
AU  - Jeremić, Sanja
AU  - Vasiljević, Branka
AU  - Prodanović, Olivera
AU  - Prodanović, Radivoje
AU  - Nikodinović-Runić, Jasmina
PY  - 2015
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1990
AB  - The enzyme 4-oxalocrotonate tautomerase (4-OT) encoded by the xylH gene is a part of the degradation pathway of aromatic compounds in Pseudomonas putida mt-2. 4-OT was described to catalyze Michael-type addition of acetaldehyde to beta-nitrostyrene, and the whole cell system based on recombinantly expressed 4-OT has been developed previously. In this study biocatalytic process based on Escherichia coli whole cells expressing 4-OT was significantly improved using immobilization and ex situ product recovery strategies. Whole cell immobilization in alginate beads was applied in biocatalytic production of 4-nitro-3-phenyl-butanal from beta-nitrostyrene and acetaldehyde. Immobilized biocatalyst showed wider pH activity range and could tolerate twofold higher initial concentrations of substrate in comparison to the free whole cell biocatalyst. Beads retained their initial activity over 10 consecutive biotransformations of the model reaction and remained suitable for the repetitive use with 85 % of the initial activity after two months of storage. Bioprocess was further improved by utilizing Amberlite XAD-2 hydrophobic resin for the product recovery. With this modification, the amount of organic solvent was reduced 40-fold in comparison to previously reported method making this biocatalytic process greener.
PB  - Springer, New York
T2  - Bioprocess and Biosystems Engineering
T1  - Immobilization of Escherichia coli cells expressing 4-oxalocrotonate tautomerase for improved biotransformation of beta-nitrostyrene
VL  - 38
IS  - 12
SP  - 2389
EP  - 2395
DO  - 10.1007/s00449-015-1474-8
ER  - 

@article{
author = "Đokić, Lidija and Spasić, Jelena and Jeremić, Sanja and Vasiljević, Branka and Prodanović, Olivera and Prodanović, Radivoje and Nikodinović-Runić, Jasmina",
year = "2015",
abstract = "The enzyme 4-oxalocrotonate tautomerase (4-OT) encoded by the xylH gene is a part of the degradation pathway of aromatic compounds in Pseudomonas putida mt-2. 4-OT was described to catalyze Michael-type addition of acetaldehyde to beta-nitrostyrene, and the whole cell system based on recombinantly expressed 4-OT has been developed previously. In this study biocatalytic process based on Escherichia coli whole cells expressing 4-OT was significantly improved using immobilization and ex situ product recovery strategies. Whole cell immobilization in alginate beads was applied in biocatalytic production of 4-nitro-3-phenyl-butanal from beta-nitrostyrene and acetaldehyde. Immobilized biocatalyst showed wider pH activity range and could tolerate twofold higher initial concentrations of substrate in comparison to the free whole cell biocatalyst. Beads retained their initial activity over 10 consecutive biotransformations of the model reaction and remained suitable for the repetitive use with 85 % of the initial activity after two months of storage. Bioprocess was further improved by utilizing Amberlite XAD-2 hydrophobic resin for the product recovery. With this modification, the amount of organic solvent was reduced 40-fold in comparison to previously reported method making this biocatalytic process greener.",
publisher = "Springer, New York",
journal = "Bioprocess and Biosystems Engineering",
title = "Immobilization of Escherichia coli cells expressing 4-oxalocrotonate tautomerase for improved biotransformation of beta-nitrostyrene",
volume = "38",
number = "12",
pages = "2389-2395",
doi = "10.1007/s00449-015-1474-8"
}

Đokić, L., Spasić, J., Jeremić, S., Vasiljević, B., Prodanović, O., Prodanović, R.,& Nikodinović-Runić, J.. (2015). Immobilization of Escherichia coli cells expressing 4-oxalocrotonate tautomerase for improved biotransformation of beta-nitrostyrene. in Bioprocess and Biosystems Engineering
Springer, New York., 38(12), 2389-2395.
https://doi.org/10.1007/s00449-015-1474-8

Đokić L, Spasić J, Jeremić S, Vasiljević B, Prodanović O, Prodanović R, Nikodinović-Runić J. Immobilization of Escherichia coli cells expressing 4-oxalocrotonate tautomerase for improved biotransformation of beta-nitrostyrene. in Bioprocess and Biosystems Engineering. 2015;38(12):2389-2395.
doi:10.1007/s00449-015-1474-8 .

Đokić, Lidija, Spasić, Jelena, Jeremić, Sanja, Vasiljević, Branka, Prodanović, Olivera, Prodanović, Radivoje, Nikodinović-Runić, Jasmina, "Immobilization of Escherichia coli cells expressing 4-oxalocrotonate tautomerase for improved biotransformation of beta-nitrostyrene" in Bioprocess and Biosystems Engineering, 38, no. 12 (2015):2389-2395,
https://doi.org/10.1007/s00449-015-1474-8 . .

TY  - DATA
AU  - Jovanović, Predrag M.
AU  - Jeremić, Sanja
AU  - Đokić, Lidija
AU  - Savić, Vladimir
AU  - Radivojević, Jelena
AU  - Maslak, Veselin
AU  - Ivković, Branka
AU  - Vasiljević, Branka
AU  - Nikodinović-Runić, Jasmina
PY  - 2014
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/3744
PB  - Elsevier Science Inc, New York
T2  - Enzyme and Microbial Technology
T1  - Supplementary data for the article: Jovanovic, P.; Jeremic, S.; Djokic, L.; Savic, V.; Radivojevic, J.; Maslak, V.; Ivkovic, B.; Vasiljevic, B.; Nikodinovic-Runic, J. Chemoselective Biocatalytic Reduction of Conjugated Nitroalkenes: New Application for an Escherichia Coli BL21(DE3) Expression Strain. Enzyme Microb. Technol. 2014, 60, 16–23. https://doi.org/10.1016/j.enzmictec.2014.03.010
UR  - https://hdl.handle.net/21.15107/rcub_cherry_3744
ER  - 

@misc{
author = "Jovanović, Predrag M. and Jeremić, Sanja and Đokić, Lidija and Savić, Vladimir and Radivojević, Jelena and Maslak, Veselin and Ivković, Branka and Vasiljević, Branka and Nikodinović-Runić, Jasmina",
year = "2014",
publisher = "Elsevier Science Inc, New York",
journal = "Enzyme and Microbial Technology",
title = "Supplementary data for the article: Jovanovic, P.; Jeremic, S.; Djokic, L.; Savic, V.; Radivojevic, J.; Maslak, V.; Ivkovic, B.; Vasiljevic, B.; Nikodinovic-Runic, J. Chemoselective Biocatalytic Reduction of Conjugated Nitroalkenes: New Application for an Escherichia Coli BL21(DE3) Expression Strain. Enzyme Microb. Technol. 2014, 60, 16–23. https://doi.org/10.1016/j.enzmictec.2014.03.010",
url = "https://hdl.handle.net/21.15107/rcub_cherry_3744"
}

Jovanović, P. M., Jeremić, S., Đokić, L., Savić, V., Radivojević, J., Maslak, V., Ivković, B., Vasiljević, B.,& Nikodinović-Runić, J.. (2014). Supplementary data for the article: Jovanovic, P.; Jeremic, S.; Djokic, L.; Savic, V.; Radivojevic, J.; Maslak, V.; Ivkovic, B.; Vasiljevic, B.; Nikodinovic-Runic, J. Chemoselective Biocatalytic Reduction of Conjugated Nitroalkenes: New Application for an Escherichia Coli BL21(DE3) Expression Strain. Enzyme Microb. Technol. 2014, 60, 16–23. https://doi.org/10.1016/j.enzmictec.2014.03.010. in Enzyme and Microbial Technology
Elsevier Science Inc, New York..
https://hdl.handle.net/21.15107/rcub_cherry_3744

Jovanović PM, Jeremić S, Đokić L, Savić V, Radivojević J, Maslak V, Ivković B, Vasiljević B, Nikodinović-Runić J. Supplementary data for the article: Jovanovic, P.; Jeremic, S.; Djokic, L.; Savic, V.; Radivojevic, J.; Maslak, V.; Ivkovic, B.; Vasiljevic, B.; Nikodinovic-Runic, J. Chemoselective Biocatalytic Reduction of Conjugated Nitroalkenes: New Application for an Escherichia Coli BL21(DE3) Expression Strain. Enzyme Microb. Technol. 2014, 60, 16–23. https://doi.org/10.1016/j.enzmictec.2014.03.010. in Enzyme and Microbial Technology. 2014;.
https://hdl.handle.net/21.15107/rcub_cherry_3744 .

Jovanović, Predrag M., Jeremić, Sanja, Đokić, Lidija, Savić, Vladimir, Radivojević, Jelena, Maslak, Veselin, Ivković, Branka, Vasiljević, Branka, Nikodinović-Runić, Jasmina, "Supplementary data for the article: Jovanovic, P.; Jeremic, S.; Djokic, L.; Savic, V.; Radivojevic, J.; Maslak, V.; Ivkovic, B.; Vasiljevic, B.; Nikodinovic-Runic, J. Chemoselective Biocatalytic Reduction of Conjugated Nitroalkenes: New Application for an Escherichia Coli BL21(DE3) Expression Strain. Enzyme Microb. Technol. 2014, 60, 16–23. https://doi.org/10.1016/j.enzmictec.2014.03.010" in Enzyme and Microbial Technology (2014),
https://hdl.handle.net/21.15107/rcub_cherry_3744 .

TY  - JOUR
AU  - Jovanović, Predrag M.
AU  - Jeremić, Sanja
AU  - Đokić, Lidija
AU  - Savić, Vladimir
AU  - Radivojević, Jelena
AU  - Maslak, Veselin
AU  - Ivković, Branka
AU  - Vasiljević, Branka
AU  - Nikodinović-Runić, Jasmina
PY  - 2014
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1786
AB  - Chemoselective reduction of activated carbon-carbon double bond in conjugated nitroalkenes was achieved using Escherichia coli BL21(DE3) whole cells. Nine different substrates have been used furnishing the reduced products in moderate to good yields. 1-Nitro-4-phenyl-1,3-butadiene and (2-nitro-1-propenyl)benzene were successfully biotransformed with corresponding product yields of 54% and 45% respectively. Using this simple and environmentally friendly system 2-(2-nitropropyl)pyridine and 2-(2-nitropropyl)naphthalene were synthesized and characterized for the first time. High substrate conversion efficiency was coupled with low enantioselectivity, however 29% enantiomeric excess was detected in the case of 2-(2-nitropropyl)pyridine. It was shown that electronic properties of the aromatic ring, which affected polarity of the double bond, were not highly influential factors in the reduction process, but the presence of the nitro functionality was essential for the reaction to proceed. 1-Phenyl-4-nitro-1,3-butadiene could not be biotransformed by whole cells of Pseudomonas putida KT2440 or Bacillus subtilis 168 while it was successfully reduced by E. coli DH5 alpha but with lower efficiency in comparison to E. coli BL21(DE3). Knockout mutant affected in nemA gene coding for N-ethylmaleimide reductase (BL21 Delta nemA) could still catalyze bioreductions suggesting multiple active reductases within E. coli BL21(DE3) biocatalyst. The described biocatalytic reduction of substituted nitroalkenes provides an efficient route for the preparation of the corresponding nitroalkanes and introduces the new application of the strain traditionally utilized for recombinant protein expression. (C) 2014 Elsevier Inc. All rights reserved.
PB  - Elsevier Science Inc, New York
T2  - Enzyme and Microbial Technology
T1  - Chemoselective biocatalytic reduction of conjugated nitroalkenes: New application for an Escherichia coli BL21(DE3) expression strain
VL  - 60
SP  - 16
EP  - 23
DO  - 10.1016/j.enzmictec.2014.03.010
ER  - 

@article{
author = "Jovanović, Predrag M. and Jeremić, Sanja and Đokić, Lidija and Savić, Vladimir and Radivojević, Jelena and Maslak, Veselin and Ivković, Branka and Vasiljević, Branka and Nikodinović-Runić, Jasmina",
year = "2014",
abstract = "Chemoselective reduction of activated carbon-carbon double bond in conjugated nitroalkenes was achieved using Escherichia coli BL21(DE3) whole cells. Nine different substrates have been used furnishing the reduced products in moderate to good yields. 1-Nitro-4-phenyl-1,3-butadiene and (2-nitro-1-propenyl)benzene were successfully biotransformed with corresponding product yields of 54% and 45% respectively. Using this simple and environmentally friendly system 2-(2-nitropropyl)pyridine and 2-(2-nitropropyl)naphthalene were synthesized and characterized for the first time. High substrate conversion efficiency was coupled with low enantioselectivity, however 29% enantiomeric excess was detected in the case of 2-(2-nitropropyl)pyridine. It was shown that electronic properties of the aromatic ring, which affected polarity of the double bond, were not highly influential factors in the reduction process, but the presence of the nitro functionality was essential for the reaction to proceed. 1-Phenyl-4-nitro-1,3-butadiene could not be biotransformed by whole cells of Pseudomonas putida KT2440 or Bacillus subtilis 168 while it was successfully reduced by E. coli DH5 alpha but with lower efficiency in comparison to E. coli BL21(DE3). Knockout mutant affected in nemA gene coding for N-ethylmaleimide reductase (BL21 Delta nemA) could still catalyze bioreductions suggesting multiple active reductases within E. coli BL21(DE3) biocatalyst. The described biocatalytic reduction of substituted nitroalkenes provides an efficient route for the preparation of the corresponding nitroalkanes and introduces the new application of the strain traditionally utilized for recombinant protein expression. (C) 2014 Elsevier Inc. All rights reserved.",
publisher = "Elsevier Science Inc, New York",
journal = "Enzyme and Microbial Technology",
title = "Chemoselective biocatalytic reduction of conjugated nitroalkenes: New application for an Escherichia coli BL21(DE3) expression strain",
volume = "60",
pages = "16-23",
doi = "10.1016/j.enzmictec.2014.03.010"
}

Jovanović, P. M., Jeremić, S., Đokić, L., Savić, V., Radivojević, J., Maslak, V., Ivković, B., Vasiljević, B.,& Nikodinović-Runić, J.. (2014). Chemoselective biocatalytic reduction of conjugated nitroalkenes: New application for an Escherichia coli BL21(DE3) expression strain. in Enzyme and Microbial Technology
Elsevier Science Inc, New York., 60, 16-23.
https://doi.org/10.1016/j.enzmictec.2014.03.010

Jovanović PM, Jeremić S, Đokić L, Savić V, Radivojević J, Maslak V, Ivković B, Vasiljević B, Nikodinović-Runić J. Chemoselective biocatalytic reduction of conjugated nitroalkenes: New application for an Escherichia coli BL21(DE3) expression strain. in Enzyme and Microbial Technology. 2014;60:16-23.
doi:10.1016/j.enzmictec.2014.03.010 .

Jovanović, Predrag M., Jeremić, Sanja, Đokić, Lidija, Savić, Vladimir, Radivojević, Jelena, Maslak, Veselin, Ivković, Branka, Vasiljević, Branka, Nikodinović-Runić, Jasmina, "Chemoselective biocatalytic reduction of conjugated nitroalkenes: New application for an Escherichia coli BL21(DE3) expression strain" in Enzyme and Microbial Technology, 60 (2014):16-23,
https://doi.org/10.1016/j.enzmictec.2014.03.010 . .

TY  - JOUR
AU  - Bajkic, Sanja
AU  - Narančić, Tanja
AU  - Đokić, Lidija
AU  - Đorđević, Dragana S.
AU  - Nikodinović-Runić, Jasmina
AU  - Morić, Ivana
AU  - Vasiljević, Branka
PY  - 2013
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1559
AB  - The bacterial diversity of the surface and deep sediment of the Copper Mining and Smelting Complex Bor, Serbia, was investigated using culture-dependent and culture-independent approaches. Sequencing analysis of 16S rDNA libraries revealed greater bacterial diversity in the surface sediment of the mining complex (MS) in comparison to deeper mine sediment (MU). While in the MS sample members of seven different phylogenetic groups were detected, in the MU sample library representatives of only three different groups were detected. The use of a culture-dependent approach revealed the presence of only three bacterial groups in both samples: Actinobacteria, Firmicutes and Proteobacteria, while six isolates exhibiting the highest metal tolerance were members of Arthrobacter and Staphylococcus genera. The most promising isolate, MSI08, was able to grow in the presence of high concentrations of Cd2+ (535 mu M), Ni2+(17 mM) and Cr6+ (38.5 mM) and as such this indigenous strain has potential in the bioremediation of the contaminated surrounds of the city of Bor.
PB  - Inst Bioloska Istrazivanja Sinisa Stankovic, Beograd
T2  - Archives of biological sciences
T1  - Microbial Diversity and Isolation of Multiple Metal-Tolerant Bacteria from  Surface and Underground Pits Within the Copper Mining and Smelting Complex Bor
VL  - 65
IS  - 1
SP  - 375
EP  - 386
DO  - 10.2298/ABS1301375B
ER  - 

@article{
author = "Bajkic, Sanja and Narančić, Tanja and Đokić, Lidija and Đorđević, Dragana S. and Nikodinović-Runić, Jasmina and Morić, Ivana and Vasiljević, Branka",
year = "2013",
abstract = "The bacterial diversity of the surface and deep sediment of the Copper Mining and Smelting Complex Bor, Serbia, was investigated using culture-dependent and culture-independent approaches. Sequencing analysis of 16S rDNA libraries revealed greater bacterial diversity in the surface sediment of the mining complex (MS) in comparison to deeper mine sediment (MU). While in the MS sample members of seven different phylogenetic groups were detected, in the MU sample library representatives of only three different groups were detected. The use of a culture-dependent approach revealed the presence of only three bacterial groups in both samples: Actinobacteria, Firmicutes and Proteobacteria, while six isolates exhibiting the highest metal tolerance were members of Arthrobacter and Staphylococcus genera. The most promising isolate, MSI08, was able to grow in the presence of high concentrations of Cd2+ (535 mu M), Ni2+(17 mM) and Cr6+ (38.5 mM) and as such this indigenous strain has potential in the bioremediation of the contaminated surrounds of the city of Bor.",
publisher = "Inst Bioloska Istrazivanja Sinisa Stankovic, Beograd",
journal = "Archives of biological sciences",
title = "Microbial Diversity and Isolation of Multiple Metal-Tolerant Bacteria from  Surface and Underground Pits Within the Copper Mining and Smelting Complex Bor",
volume = "65",
number = "1",
pages = "375-386",
doi = "10.2298/ABS1301375B"
}

Bajkic, S., Narančić, T., Đokić, L., Đorđević, D. S., Nikodinović-Runić, J., Morić, I.,& Vasiljević, B.. (2013). Microbial Diversity and Isolation of Multiple Metal-Tolerant Bacteria from  Surface and Underground Pits Within the Copper Mining and Smelting Complex Bor. in Archives of biological sciences
Inst Bioloska Istrazivanja Sinisa Stankovic, Beograd., 65(1), 375-386.
https://doi.org/10.2298/ABS1301375B

Bajkic S, Narančić T, Đokić L, Đorđević DS, Nikodinović-Runić J, Morić I, Vasiljević B. Microbial Diversity and Isolation of Multiple Metal-Tolerant Bacteria from  Surface and Underground Pits Within the Copper Mining and Smelting Complex Bor. in Archives of biological sciences. 2013;65(1):375-386.
doi:10.2298/ABS1301375B .

Bajkic, Sanja, Narančić, Tanja, Đokić, Lidija, Đorđević, Dragana S., Nikodinović-Runić, Jasmina, Morić, Ivana, Vasiljević, Branka, "Microbial Diversity and Isolation of Multiple Metal-Tolerant Bacteria from  Surface and Underground Pits Within the Copper Mining and Smelting Complex Bor" in Archives of biological sciences, 65, no. 1 (2013):375-386,
https://doi.org/10.2298/ABS1301375B . .

TY  - JOUR
AU  - Đokić, Lidija
AU  - Narančić, Tanja
AU  - Biocanin, Marjan
AU  - Saljnikov, Elmira
AU  - Casey, Eoin
AU  - Vasiljević, Branka
AU  - Nikodinović-Runić, Jasmina
PY  - 2013
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1372
AB  - Biodegradation of phenol in four natural soils (loamy sand, sandy loam, sandy clay loam and loam) by indigenous microorganisms and in soils augmented by the Bacillus sp. PS11 was studied. During the laboratory soil microcosm experiments, the total removal of 2 g of phenol per kg of soil was achieved in all soil types in between 6 and 21 days. All biodegradation data was found to fit very well to saturation kinetics. The most efficient phenol removal was observed in the loamy woodland soil that contained the least amount of sand (42.5%) and the most silt and clay fraction (57.5%) in comparison to other three soil samples. However, amending sandy loam sample to contain more clay (from 13.5% to 30%) negatively affected the phenol removal rate, while increasing sand content (from 74.4% to 90%) resulted in the two times faster phenol removal in comparison to natural soil type. Bacillus sp. PS11 performed well in both pure culture and in the presence of soil microorganisms. Indigenous bacteria from sandy clay loam soil type possessed the ability of phenol bioremediation and almost whole amount of added phenol (2 g kg soil(-1)) was degraded within 9 days, whereas augmentation by Bacillus sp. PS11 improved the phenol removal by 20%. Carrying out small scale soil model experiments and amending soil granulometric properties by addition of clay or sand minerals is suggested as an effective and economically interesting way of enhancing bacterial soil bioremediation.
PB  - Elsevier Science Bv, Amsterdam
T2  - Applied Soil Ecology
T1  - Phenol removal from four different natural soil types by Bacillus sp PS11
VL  - 70
SP  - 1
EP  - 8
DO  - 10.1016/j.apsoil.2013.04.002
ER  - 

@article{
author = "Đokić, Lidija and Narančić, Tanja and Biocanin, Marjan and Saljnikov, Elmira and Casey, Eoin and Vasiljević, Branka and Nikodinović-Runić, Jasmina",
year = "2013",
abstract = "Biodegradation of phenol in four natural soils (loamy sand, sandy loam, sandy clay loam and loam) by indigenous microorganisms and in soils augmented by the Bacillus sp. PS11 was studied. During the laboratory soil microcosm experiments, the total removal of 2 g of phenol per kg of soil was achieved in all soil types in between 6 and 21 days. All biodegradation data was found to fit very well to saturation kinetics. The most efficient phenol removal was observed in the loamy woodland soil that contained the least amount of sand (42.5%) and the most silt and clay fraction (57.5%) in comparison to other three soil samples. However, amending sandy loam sample to contain more clay (from 13.5% to 30%) negatively affected the phenol removal rate, while increasing sand content (from 74.4% to 90%) resulted in the two times faster phenol removal in comparison to natural soil type. Bacillus sp. PS11 performed well in both pure culture and in the presence of soil microorganisms. Indigenous bacteria from sandy clay loam soil type possessed the ability of phenol bioremediation and almost whole amount of added phenol (2 g kg soil(-1)) was degraded within 9 days, whereas augmentation by Bacillus sp. PS11 improved the phenol removal by 20%. Carrying out small scale soil model experiments and amending soil granulometric properties by addition of clay or sand minerals is suggested as an effective and economically interesting way of enhancing bacterial soil bioremediation.",
publisher = "Elsevier Science Bv, Amsterdam",
journal = "Applied Soil Ecology",
title = "Phenol removal from four different natural soil types by Bacillus sp PS11",
volume = "70",
pages = "1-8",
doi = "10.1016/j.apsoil.2013.04.002"
}

Đokić, L., Narančić, T., Biocanin, M., Saljnikov, E., Casey, E., Vasiljević, B.,& Nikodinović-Runić, J.. (2013). Phenol removal from four different natural soil types by Bacillus sp PS11. in Applied Soil Ecology
Elsevier Science Bv, Amsterdam., 70, 1-8.
https://doi.org/10.1016/j.apsoil.2013.04.002

Đokić L, Narančić T, Biocanin M, Saljnikov E, Casey E, Vasiljević B, Nikodinović-Runić J. Phenol removal from four different natural soil types by Bacillus sp PS11. in Applied Soil Ecology. 2013;70:1-8.
doi:10.1016/j.apsoil.2013.04.002 .

Đokić, Lidija, Narančić, Tanja, Biocanin, Marjan, Saljnikov, Elmira, Casey, Eoin, Vasiljević, Branka, Nikodinović-Runić, Jasmina, "Phenol removal from four different natural soil types by Bacillus sp PS11" in Applied Soil Ecology, 70 (2013):1-8,
https://doi.org/10.1016/j.apsoil.2013.04.002 . .

TY  - JOUR
AU  - Gojgić-Cvijović, Gordana D.
AU  - Milic, J. S.
AU  - Šolević-Knudsen, Tatjana
AU  - Beškoski, Vladimir
AU  - Ilić, Mila V.
AU  - Đokić, Lidija
AU  - Narancic, T. M.
AU  - Vrvić, Miroslav M.
PY  - 2012
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1063
AB  - This article presents a study of the efficiency and degradation pattern of samples of petroleum sludge and polluted sandy soil from an oil refinery. A bacterial consortium, consisting of strains from the genera Pseudomonas, Achromobacter, Bacillus and Micromonospora, was isolated from a petroleum sludge sample and characterized. The addition of nitrogen and phosphorus nutrients and a chemical surfactant to both the samples and bioaugmentation to the soil sample were applied under laboratory conditions. The extent of biodegradation was monitored by the gravimetric method and analysis of the residual oil by gas chromatography. Over a 12-week experiment, the achieved degree of TPH (total petroleum hydrocarbon) degradation amounted to 82-88% in the petroleum sludge and 86-91% in the polluted soil. Gas chromatography-mass spectrometry was utilized to determine the biodegradability and degradation rates of n-alkanes, isoprenoids, steranes, diasteranes and terpanes. Complete degradation of the n-alkanes and isoprenoids fractions occurred in both the samples. In addition, the intensities of the peaks corresponding to tricyclic terpenes and homohopanes were decreased, while significant changes were also observed in the distribution of diasteranes and steranes.
PB  - Springer, New York
T2  - Biodegradation
T1  - Biodegradation of petroleum sludge and petroleum polluted soil by a bacterial consortium: a laboratory study
VL  - 23
IS  - 1
SP  - 1
EP  - 14
DO  - 10.1007/s10532-011-9481-1
ER  - 

@article{
author = "Gojgić-Cvijović, Gordana D. and Milic, J. S. and Šolević-Knudsen, Tatjana and Beškoski, Vladimir and Ilić, Mila V. and Đokić, Lidija and Narancic, T. M. and Vrvić, Miroslav M.",
year = "2012",
abstract = "This article presents a study of the efficiency and degradation pattern of samples of petroleum sludge and polluted sandy soil from an oil refinery. A bacterial consortium, consisting of strains from the genera Pseudomonas, Achromobacter, Bacillus and Micromonospora, was isolated from a petroleum sludge sample and characterized. The addition of nitrogen and phosphorus nutrients and a chemical surfactant to both the samples and bioaugmentation to the soil sample were applied under laboratory conditions. The extent of biodegradation was monitored by the gravimetric method and analysis of the residual oil by gas chromatography. Over a 12-week experiment, the achieved degree of TPH (total petroleum hydrocarbon) degradation amounted to 82-88% in the petroleum sludge and 86-91% in the polluted soil. Gas chromatography-mass spectrometry was utilized to determine the biodegradability and degradation rates of n-alkanes, isoprenoids, steranes, diasteranes and terpanes. Complete degradation of the n-alkanes and isoprenoids fractions occurred in both the samples. In addition, the intensities of the peaks corresponding to tricyclic terpenes and homohopanes were decreased, while significant changes were also observed in the distribution of diasteranes and steranes.",
publisher = "Springer, New York",
journal = "Biodegradation",
title = "Biodegradation of petroleum sludge and petroleum polluted soil by a bacterial consortium: a laboratory study",
volume = "23",
number = "1",
pages = "1-14",
doi = "10.1007/s10532-011-9481-1"
}

Gojgić-Cvijović, G. D., Milic, J. S., Šolević-Knudsen, T., Beškoski, V., Ilić, M. V., Đokić, L., Narancic, T. M.,& Vrvić, M. M.. (2012). Biodegradation of petroleum sludge and petroleum polluted soil by a bacterial consortium: a laboratory study. in Biodegradation
Springer, New York., 23(1), 1-14.
https://doi.org/10.1007/s10532-011-9481-1

Gojgić-Cvijović GD, Milic JS, Šolević-Knudsen T, Beškoski V, Ilić MV, Đokić L, Narancic TM, Vrvić MM. Biodegradation of petroleum sludge and petroleum polluted soil by a bacterial consortium: a laboratory study. in Biodegradation. 2012;23(1):1-14.
doi:10.1007/s10532-011-9481-1 .

Gojgić-Cvijović, Gordana D., Milic, J. S., Šolević-Knudsen, Tatjana, Beškoski, Vladimir, Ilić, Mila V., Đokić, Lidija, Narancic, T. M., Vrvić, Miroslav M., "Biodegradation of petroleum sludge and petroleum polluted soil by a bacterial consortium: a laboratory study" in Biodegradation, 23, no. 1 (2012):1-14,
https://doi.org/10.1007/s10532-011-9481-1 . .

TY  - JOUR
AU  - Narančić, Tanja
AU  - Đokić, Lidija
AU  - Kenny, Shane T.
AU  - O'Connor, Kevin E.
AU  - Radulovic, Vanja
AU  - Nikodinović-Runić, Jasmina
AU  - Vasiljević, Branka
PY  - 2012
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1064
AB  - Gram-positive bacteria from river sediments affected by the proximity of a petrochemical industrial site were isolated and characterized with respect to their ability to degrade a wide range of aromatic compounds. In this study we identified metabolically diverse Gram-positive bacteria capable of growth on wide range aromatic compounds in the presence of heavy metals and with the ability to accumulate biopolymers. Thirty-four isolates that were able to use 9 or more common aromatic pollutants, such as benzene, biphenyl, naphthalene etc. as a sole source of carbon and energy included members of Bacillus, Arthrobacter, Rhodococcus, Gordonia, Streptomyces, and Staphylococcus genus. Rhodococcus sp. TN105, Gordonia sp. TN103 and Arthrobacter sp. TN221 were identified as novel strains. Nine isolates were able to grow in the presence of one or more metals (mercury, cadmium, nickel) at high concentration (100 mM). Seven isolates could degrade 15 different aromatic compounds and could grow in the presence of one or more heavy metals. Two of these isolates were resistant to multiple antibiotics including erythromycin and nalidixic acid. One third of isolates could accumulate at least one biopolymer. Twelve isolates (mainly Bacillus sp. and Arthrobacter sp.) accumulated polyphosphate, 3 Bacillus sp. accumulated polyhydroxybutyrate, while 4 isolates could accumulate exopolysaccharides. (C) 2012 Elsevier B.V. All rights reserved.
PB  - Elsevier Science Bv, Amsterdam
T2  - Journal of Hazardous Materials
T1  - Metabolic versatility of Gram-positive microbial isolates from contaminated river sediments
VL  - 215
SP  - 243
EP  - 251
DO  - 10.1016/j.jhazmat.2012.02.059
ER  - 

@article{
author = "Narančić, Tanja and Đokić, Lidija and Kenny, Shane T. and O'Connor, Kevin E. and Radulovic, Vanja and Nikodinović-Runić, Jasmina and Vasiljević, Branka",
year = "2012",
abstract = "Gram-positive bacteria from river sediments affected by the proximity of a petrochemical industrial site were isolated and characterized with respect to their ability to degrade a wide range of aromatic compounds. In this study we identified metabolically diverse Gram-positive bacteria capable of growth on wide range aromatic compounds in the presence of heavy metals and with the ability to accumulate biopolymers. Thirty-four isolates that were able to use 9 or more common aromatic pollutants, such as benzene, biphenyl, naphthalene etc. as a sole source of carbon and energy included members of Bacillus, Arthrobacter, Rhodococcus, Gordonia, Streptomyces, and Staphylococcus genus. Rhodococcus sp. TN105, Gordonia sp. TN103 and Arthrobacter sp. TN221 were identified as novel strains. Nine isolates were able to grow in the presence of one or more metals (mercury, cadmium, nickel) at high concentration (100 mM). Seven isolates could degrade 15 different aromatic compounds and could grow in the presence of one or more heavy metals. Two of these isolates were resistant to multiple antibiotics including erythromycin and nalidixic acid. One third of isolates could accumulate at least one biopolymer. Twelve isolates (mainly Bacillus sp. and Arthrobacter sp.) accumulated polyphosphate, 3 Bacillus sp. accumulated polyhydroxybutyrate, while 4 isolates could accumulate exopolysaccharides. (C) 2012 Elsevier B.V. All rights reserved.",
publisher = "Elsevier Science Bv, Amsterdam",
journal = "Journal of Hazardous Materials",
title = "Metabolic versatility of Gram-positive microbial isolates from contaminated river sediments",
volume = "215",
pages = "243-251",
doi = "10.1016/j.jhazmat.2012.02.059"
}

Narančić, T., Đokić, L., Kenny, S. T., O'Connor, K. E., Radulovic, V., Nikodinović-Runić, J.,& Vasiljević, B.. (2012). Metabolic versatility of Gram-positive microbial isolates from contaminated river sediments. in Journal of Hazardous Materials
Elsevier Science Bv, Amsterdam., 215, 243-251.
https://doi.org/10.1016/j.jhazmat.2012.02.059

Narančić T, Đokić L, Kenny ST, O'Connor KE, Radulovic V, Nikodinović-Runić J, Vasiljević B. Metabolic versatility of Gram-positive microbial isolates from contaminated river sediments. in Journal of Hazardous Materials. 2012;215:243-251.
doi:10.1016/j.jhazmat.2012.02.059 .

Narančić, Tanja, Đokić, Lidija, Kenny, Shane T., O'Connor, Kevin E., Radulovic, Vanja, Nikodinović-Runić, Jasmina, Vasiljević, Branka, "Metabolic versatility of Gram-positive microbial isolates from contaminated river sediments" in Journal of Hazardous Materials, 215 (2012):243-251,
https://doi.org/10.1016/j.jhazmat.2012.02.059 . .

TY  - JOUR
AU  - Narancic, T.
AU  - Kenny, S. T.
AU  - Đokić, Lidija
AU  - Vasiljević, Branka
AU  - O'Connor, K. E.
AU  - Nikodinović-Runić, Jasmina
PY  - 2012
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1327
AB  - Aims The aim of this study was to convert numerous polyaromatic and monoaromatic hydrocarbons into biodegradable polymer medium-chain-length polyhydroxyalkanoate (mcl-PHA). Methods and Results Using naphthalene enrichment cultivation method, we have isolated seven bacterial strains from the river sediment exposed to petrochemical industry effluents. In addition to naphthalene, all seven strains could utilize between 12 and 17 different aromatic substrates, including toluene, benzene and biphenyl. Only one isolate that was identified as Pseudomonas sp. TN301 could accumulate mcl-PHA from naphthalene to 23% of cell dry weight. Owing to poor solubility, a method of supplying highly hydrophobic polyaromatic hydrocarbons to a culture medium was developed. The best biomass and mcl-PHA yields were achieved with the addition of synthetic surfactant Tween 80 (0.5 g l-1). We have shown that Pseudomonas sp. TN301 can accumulate mcl-PHA from a wide range of polyaromatic and monoaromatic hydrocarbons, and mixtures thereof, while it could also accumulate polyphosphates and was tolerant to the presence of heavy metal (100 mmol l-1 cadmium and 20 mmol l-1 nickel). Conclusions A new Pseudomonas strain was isolated and identified with the ability to accumulate mcl-PHA from a variety of aromatic hydrocarbons. Significance and Impact of the Study This study is the first report on the ability of a bacterial strain to convert a range of polyaromatic hydrocarbon compounds to the biodegradable polymer (mcl-PHA). Mcl-PHA is gaining importance as a promising biodegradable thermoelastomer, and therefore, isolation of new producing strains is highly significant. Furthermore, this strain has the ability to utilize a range of hydrocarbons, which often occur as mixtures and could potentially be employed in the recently described efforts to convert waste materials to PHA.
PB  - Wiley-Blackwell, Hoboken
T2  - Journal of Applied Microbiology
T1  - Medium-chain-length polyhydroxyalkanoate production by newly isolated Pseudomonas sp TN301 from a wide range of polyaromatic and monoaromatic hydrocarbons
VL  - 113
IS  - 3
SP  - 508
EP  - 520
DO  - 10.1111/j.1365-2672.2012.05353.x
ER  - 

@article{
author = "Narancic, T. and Kenny, S. T. and Đokić, Lidija and Vasiljević, Branka and O'Connor, K. E. and Nikodinović-Runić, Jasmina",
year = "2012",
abstract = "Aims The aim of this study was to convert numerous polyaromatic and monoaromatic hydrocarbons into biodegradable polymer medium-chain-length polyhydroxyalkanoate (mcl-PHA). Methods and Results Using naphthalene enrichment cultivation method, we have isolated seven bacterial strains from the river sediment exposed to petrochemical industry effluents. In addition to naphthalene, all seven strains could utilize between 12 and 17 different aromatic substrates, including toluene, benzene and biphenyl. Only one isolate that was identified as Pseudomonas sp. TN301 could accumulate mcl-PHA from naphthalene to 23% of cell dry weight. Owing to poor solubility, a method of supplying highly hydrophobic polyaromatic hydrocarbons to a culture medium was developed. The best biomass and mcl-PHA yields were achieved with the addition of synthetic surfactant Tween 80 (0.5 g l-1). We have shown that Pseudomonas sp. TN301 can accumulate mcl-PHA from a wide range of polyaromatic and monoaromatic hydrocarbons, and mixtures thereof, while it could also accumulate polyphosphates and was tolerant to the presence of heavy metal (100 mmol l-1 cadmium and 20 mmol l-1 nickel). Conclusions A new Pseudomonas strain was isolated and identified with the ability to accumulate mcl-PHA from a variety of aromatic hydrocarbons. Significance and Impact of the Study This study is the first report on the ability of a bacterial strain to convert a range of polyaromatic hydrocarbon compounds to the biodegradable polymer (mcl-PHA). Mcl-PHA is gaining importance as a promising biodegradable thermoelastomer, and therefore, isolation of new producing strains is highly significant. Furthermore, this strain has the ability to utilize a range of hydrocarbons, which often occur as mixtures and could potentially be employed in the recently described efforts to convert waste materials to PHA.",
publisher = "Wiley-Blackwell, Hoboken",
journal = "Journal of Applied Microbiology",
title = "Medium-chain-length polyhydroxyalkanoate production by newly isolated Pseudomonas sp TN301 from a wide range of polyaromatic and monoaromatic hydrocarbons",
volume = "113",
number = "3",
pages = "508-520",
doi = "10.1111/j.1365-2672.2012.05353.x"
}

Narancic, T., Kenny, S. T., Đokić, L., Vasiljević, B., O'Connor, K. E.,& Nikodinović-Runić, J.. (2012). Medium-chain-length polyhydroxyalkanoate production by newly isolated Pseudomonas sp TN301 from a wide range of polyaromatic and monoaromatic hydrocarbons. in Journal of Applied Microbiology
Wiley-Blackwell, Hoboken., 113(3), 508-520.
https://doi.org/10.1111/j.1365-2672.2012.05353.x

Narancic T, Kenny ST, Đokić L, Vasiljević B, O'Connor KE, Nikodinović-Runić J. Medium-chain-length polyhydroxyalkanoate production by newly isolated Pseudomonas sp TN301 from a wide range of polyaromatic and monoaromatic hydrocarbons. in Journal of Applied Microbiology. 2012;113(3):508-520.
doi:10.1111/j.1365-2672.2012.05353.x .

Narancic, T., Kenny, S. T., Đokić, Lidija, Vasiljević, Branka, O'Connor, K. E., Nikodinović-Runić, Jasmina, "Medium-chain-length polyhydroxyalkanoate production by newly isolated Pseudomonas sp TN301 from a wide range of polyaromatic and monoaromatic hydrocarbons" in Journal of Applied Microbiology, 113, no. 3 (2012):508-520,
https://doi.org/10.1111/j.1365-2672.2012.05353.x . .

TY  - JOUR
AU  - Đokić, Lidija
AU  - Narančić, Tanja
AU  - Nikodinović-Runić, Jasmina
AU  - Savic, Miloje
AU  - Vasiljević, Branka
PY  - 2011
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1183
AB  - Four new Gram-positive, phenol-degrading strains were isolated from the rhizospheres of endemorelict plants Ramonda serbica and Ramonda nathaliae known to exude high amounts of phenolics in the soil. Isolates were designated Bacillus sp. PS1, Bacillus sp. PS11, Streptomyces sp. PS12, and Streptomyces sp. PN1 based on 16S rDNA sequence and biochemical analysis. In addition to their ability to tolerate and utilize high amounts of phenol of either up to 800 or up to 1,400 mg l(-1) without apparent inhibition in growth, all four strains were also able to degrade a broad range of aromatic substrates including benzene, toluene, ethylbenzene, xylenes, styrene, halogenated benzenes, and naphthalene. Isolates were able to grow in pure culture and in defined mixed culture on phenol and on the mixture of BTEX (benzene, toluene, ethylbenzene, and xylenes) compounds as a sole source of carbon and energy. Pure culture of Bacillus sp. PS11 yielded 1.5-fold higher biomass amounts in comparison to mixed culture, under all conditions. Strains successfully degraded phenol in the soil model system (2 g kg(-1)) within 6 days. Activities of phenol hydroxylase, catechol 1,2-dioxygenase, and catechol 2,3-dioxygenase were detected and analyzed from the crude cell extract of the isolates. While all four strains use ortho degradation pathway, enzyme indicative of meta degradation pathway (catechol 2,3-dioxygenase) was also detected in Bacillus sp. PS11 and Streptomyces sp. PN1. Phenol degradation activities were induced 2 h after supplementation by phenol, but not by catechol. Catechol slightly inhibited activity of catechol 2,3-dioxygenase in strains PS11 and PN1.
PB  - Springer, New York
T2  - Applied Microbiology and Biotechnology
T1  - Isolation and characterization of four novel Gram-positive bacteria associated with the rhizosphere of two endemorelict plants capable of degrading a broad range of aromatic substrates
VL  - 91
IS  - 4
SP  - 1227
EP  - 1238
DO  - 10.1007/s00253-011-3426-9
ER  - 

@article{
author = "Đokić, Lidija and Narančić, Tanja and Nikodinović-Runić, Jasmina and Savic, Miloje and Vasiljević, Branka",
year = "2011",
abstract = "Four new Gram-positive, phenol-degrading strains were isolated from the rhizospheres of endemorelict plants Ramonda serbica and Ramonda nathaliae known to exude high amounts of phenolics in the soil. Isolates were designated Bacillus sp. PS1, Bacillus sp. PS11, Streptomyces sp. PS12, and Streptomyces sp. PN1 based on 16S rDNA sequence and biochemical analysis. In addition to their ability to tolerate and utilize high amounts of phenol of either up to 800 or up to 1,400 mg l(-1) without apparent inhibition in growth, all four strains were also able to degrade a broad range of aromatic substrates including benzene, toluene, ethylbenzene, xylenes, styrene, halogenated benzenes, and naphthalene. Isolates were able to grow in pure culture and in defined mixed culture on phenol and on the mixture of BTEX (benzene, toluene, ethylbenzene, and xylenes) compounds as a sole source of carbon and energy. Pure culture of Bacillus sp. PS11 yielded 1.5-fold higher biomass amounts in comparison to mixed culture, under all conditions. Strains successfully degraded phenol in the soil model system (2 g kg(-1)) within 6 days. Activities of phenol hydroxylase, catechol 1,2-dioxygenase, and catechol 2,3-dioxygenase were detected and analyzed from the crude cell extract of the isolates. While all four strains use ortho degradation pathway, enzyme indicative of meta degradation pathway (catechol 2,3-dioxygenase) was also detected in Bacillus sp. PS11 and Streptomyces sp. PN1. Phenol degradation activities were induced 2 h after supplementation by phenol, but not by catechol. Catechol slightly inhibited activity of catechol 2,3-dioxygenase in strains PS11 and PN1.",
publisher = "Springer, New York",
journal = "Applied Microbiology and Biotechnology",
title = "Isolation and characterization of four novel Gram-positive bacteria associated with the rhizosphere of two endemorelict plants capable of degrading a broad range of aromatic substrates",
volume = "91",
number = "4",
pages = "1227-1238",
doi = "10.1007/s00253-011-3426-9"
}

Đokić, L., Narančić, T., Nikodinović-Runić, J., Savic, M.,& Vasiljević, B.. (2011). Isolation and characterization of four novel Gram-positive bacteria associated with the rhizosphere of two endemorelict plants capable of degrading a broad range of aromatic substrates. in Applied Microbiology and Biotechnology
Springer, New York., 91(4), 1227-1238.
https://doi.org/10.1007/s00253-011-3426-9

Đokić L, Narančić T, Nikodinović-Runić J, Savic M, Vasiljević B. Isolation and characterization of four novel Gram-positive bacteria associated with the rhizosphere of two endemorelict plants capable of degrading a broad range of aromatic substrates. in Applied Microbiology and Biotechnology. 2011;91(4):1227-1238.
doi:10.1007/s00253-011-3426-9 .

Đokić, Lidija, Narančić, Tanja, Nikodinović-Runić, Jasmina, Savic, Miloje, Vasiljević, Branka, "Isolation and characterization of four novel Gram-positive bacteria associated with the rhizosphere of two endemorelict plants capable of degrading a broad range of aromatic substrates" in Applied Microbiology and Biotechnology, 91, no. 4 (2011):1227-1238,
https://doi.org/10.1007/s00253-011-3426-9 . .