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C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study

Dragelj, Jovan Lj.; Stanković, Ivana M.; Božinovski, Dragana M.; Meyer, Tim; Veljković, Dušan Ž.; Medaković, Vesna; Knapp, Ernst-Walter; Zarić, Snežana D.

(Amer Chemical Soc, Washington, 2016)

TY  - JOUR
AU  - Dragelj, Jovan Lj.
AU  - Stanković, Ivana M.
AU  - Božinovski, Dragana M.
AU  - Meyer, Tim
AU  - Veljković, Dušan Ž.
AU  - Medaković, Vesna
AU  - Knapp, Ernst-Walter
AU  - Zarić, Snežana D.
PY  - 2016
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/1910
AB  - C-H/O interactions of aromatic C-H donors within proteins have been studied by analyzing the data in the Protein Data Bank (PDB). The C-H/O interactions were studied between aromatic donors; phenylalanine, tyrosine, and tryptophan and the acceptors; alcohol, backbone amide, and side-chain amide groups. The analysis of the C-H-O angle indicates that protein C-H donors do not show a preference for linear contacts. Although there is no tendency for linear C-H/O interactions, there are only around 3% of bifurcated C-H/O interactions. Furthermore, the analyses of the C-H/O interactions indicate an influence of simultaneous classical hydrogen bonds, especially for the tyrosine systems. The calculated electrostatic potential maps for model systems can explain the results of the crystallographic analysis. These results can be important for recognizing the C-H/O interaction of aromatic rings in the crystal structures of proteic systems.
PB  - Amer Chemical Soc, Washington
T2  - Crystal Growth and Design
T1  - C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study
VL  - 16
IS  - 4
SP  - 1948
EP  - 1957
DO  - 10.1021/acs.cgd.5b01543
ER  - 
@article{
author = "Dragelj, Jovan Lj. and Stanković, Ivana M. and Božinovski, Dragana M. and Meyer, Tim and Veljković, Dušan Ž. and Medaković, Vesna and Knapp, Ernst-Walter and Zarić, Snežana D.",
year = "2016",
abstract = "C-H/O interactions of aromatic C-H donors within proteins have been studied by analyzing the data in the Protein Data Bank (PDB). The C-H/O interactions were studied between aromatic donors; phenylalanine, tyrosine, and tryptophan and the acceptors; alcohol, backbone amide, and side-chain amide groups. The analysis of the C-H-O angle indicates that protein C-H donors do not show a preference for linear contacts. Although there is no tendency for linear C-H/O interactions, there are only around 3% of bifurcated C-H/O interactions. Furthermore, the analyses of the C-H/O interactions indicate an influence of simultaneous classical hydrogen bonds, especially for the tyrosine systems. The calculated electrostatic potential maps for model systems can explain the results of the crystallographic analysis. These results can be important for recognizing the C-H/O interaction of aromatic rings in the crystal structures of proteic systems.",
publisher = "Amer Chemical Soc, Washington",
journal = "Crystal Growth and Design",
title = "C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study",
volume = "16",
number = "4",
pages = "1948-1957",
doi = "10.1021/acs.cgd.5b01543"
}
Dragelj, J. Lj., Stanković, I. M., Božinovski, D. M., Meyer, T., Veljković, D. Ž., Medaković, V., Knapp, E.,& Zarić, S. D.. (2016). C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study. in Crystal Growth and Design
Amer Chemical Soc, Washington., 16(4), 1948-1957.
https://doi.org/10.1021/acs.cgd.5b01543
Dragelj JL, Stanković IM, Božinovski DM, Meyer T, Veljković DŽ, Medaković V, Knapp E, Zarić SD. C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study. in Crystal Growth and Design. 2016;16(4):1948-1957.
doi:10.1021/acs.cgd.5b01543 .
Dragelj, Jovan Lj., Stanković, Ivana M., Božinovski, Dragana M., Meyer, Tim, Veljković, Dušan Ž., Medaković, Vesna, Knapp, Ernst-Walter, Zarić, Snežana D., "C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study" in Crystal Growth and Design, 16, no. 4 (2016):1948-1957,
https://doi.org/10.1021/acs.cgd.5b01543 . .
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20
16
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Supplementary data for the article: Dragelj, J. Lj.; Stanković, I. M.; Božinovski, D. M.; Meyer, T.; Veljković, D. Z.; Medaković, V. B.; Knapp, E.-W.; Zarić, S. D. C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study. Crystal Growth and Design 2016, 16 (4), 1948–1957. https://doi.org/10.1021/acs.cgd.5b01543

Dragelj, Jovan Lj.; Stanković, Ivana M.; Božinovski, Dragana M.; Meyer, Tim; Veljković, Dušan Ž.; Medaković, Vesna; Knapp, Ernst-Walter; Zarić, Snežana D.

(Amer Chemical Soc, Washington, 2016)

TY  - DATA
AU  - Dragelj, Jovan Lj.
AU  - Stanković, Ivana M.
AU  - Božinovski, Dragana M.
AU  - Meyer, Tim
AU  - Veljković, Dušan Ž.
AU  - Medaković, Vesna
AU  - Knapp, Ernst-Walter
AU  - Zarić, Snežana D.
PY  - 2016
UR  - https://cherry.chem.bg.ac.rs/handle/123456789/3393
PB  - Amer Chemical Soc, Washington
T2  - Crystal Growth and Design
T1  - Supplementary data for the article: Dragelj, J. Lj.; Stanković, I. M.; Božinovski, D. M.; Meyer, T.; Veljković, D. Z.; Medaković, V. B.; Knapp, E.-W.; Zarić, S. D. C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study. Crystal Growth and Design 2016, 16 (4), 1948–1957. https://doi.org/10.1021/acs.cgd.5b01543
UR  - https://hdl.handle.net/21.15107/rcub_cherry_3393
ER  - 
@misc{
author = "Dragelj, Jovan Lj. and Stanković, Ivana M. and Božinovski, Dragana M. and Meyer, Tim and Veljković, Dušan Ž. and Medaković, Vesna and Knapp, Ernst-Walter and Zarić, Snežana D.",
year = "2016",
publisher = "Amer Chemical Soc, Washington",
journal = "Crystal Growth and Design",
title = "Supplementary data for the article: Dragelj, J. Lj.; Stanković, I. M.; Božinovski, D. M.; Meyer, T.; Veljković, D. Z.; Medaković, V. B.; Knapp, E.-W.; Zarić, S. D. C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study. Crystal Growth and Design 2016, 16 (4), 1948–1957. https://doi.org/10.1021/acs.cgd.5b01543",
url = "https://hdl.handle.net/21.15107/rcub_cherry_3393"
}
Dragelj, J. Lj., Stanković, I. M., Božinovski, D. M., Meyer, T., Veljković, D. Ž., Medaković, V., Knapp, E.,& Zarić, S. D.. (2016). Supplementary data for the article: Dragelj, J. Lj.; Stanković, I. M.; Božinovski, D. M.; Meyer, T.; Veljković, D. Z.; Medaković, V. B.; Knapp, E.-W.; Zarić, S. D. C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study. Crystal Growth and Design 2016, 16 (4), 1948–1957. https://doi.org/10.1021/acs.cgd.5b01543. in Crystal Growth and Design
Amer Chemical Soc, Washington..
https://hdl.handle.net/21.15107/rcub_cherry_3393
Dragelj JL, Stanković IM, Božinovski DM, Meyer T, Veljković DŽ, Medaković V, Knapp E, Zarić SD. Supplementary data for the article: Dragelj, J. Lj.; Stanković, I. M.; Božinovski, D. M.; Meyer, T.; Veljković, D. Z.; Medaković, V. B.; Knapp, E.-W.; Zarić, S. D. C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study. Crystal Growth and Design 2016, 16 (4), 1948–1957. https://doi.org/10.1021/acs.cgd.5b01543. in Crystal Growth and Design. 2016;.
https://hdl.handle.net/21.15107/rcub_cherry_3393 .
Dragelj, Jovan Lj., Stanković, Ivana M., Božinovski, Dragana M., Meyer, Tim, Veljković, Dušan Ž., Medaković, Vesna, Knapp, Ernst-Walter, Zarić, Snežana D., "Supplementary data for the article: Dragelj, J. Lj.; Stanković, I. M.; Božinovski, D. M.; Meyer, T.; Veljković, D. Z.; Medaković, V. B.; Knapp, E.-W.; Zarić, S. D. C-H/O Interactions of Aromatic CH Donors within Proteins: A Crystallographic Study. Crystal Growth and Design 2016, 16 (4), 1948–1957. https://doi.org/10.1021/acs.cgd.5b01543" in Crystal Growth and Design (2016),
https://hdl.handle.net/21.15107/rcub_cherry_3393 .