A Flow Cytometry-Based Screening System for Directed Evolution of Proteases
Само за регистроване кориснике
2011
Чланак у часопису (Објављена верзија)
Метаподаци
Приказ свих података о документуАпстракт
Proteases are industrially important enzymes but often have to be improved for their catalytic efficiency and stabilities to suit applications. Flow cytometry screening technology based on in vitro compartmentalization in double emulsion had been developed and applied on directed evolution of paraoxonase and beta-galactosidase. Further advancements of flow cytometry-based screening technologies will enable an ultra-high throughput of variants offering novel opportunities in directed enzyme evolution under high mutational loads. For the industrially important enzyme class of proteases, a first flow cytometry-based screening system for directed protease evolution has been developed based on an extracellular protease-deficient Bacillus subtilis strain (WB800N), a model protease (subtilisin Carlsberg), and a water-in-oil-in-water double-emulsion technology. B. subtilis WB800N cells are encapsulated in double emulsion with a fluorogenic substrate (rhodamine 110-containing peptide), allowing... the screening of protease variants in femtoliter compartments at high throughput. The protease screening technology was validated by employing an epPCR mutant library with a high mutational load and screened for increased resistance toward the inhibitor antipain dihydrochloride. A variant (K127R, T237P, M239I, I269V, Y310F, I372V) with an improved relative resistance was isolated from a small population of active variants, validating the reported protease flow cytometry screening technology for increased inhibitor resistance. (Journal of Biomolecular Screening 2011;16:285-294)
Кључне речи:
directed evolution / protease / flow cytometry / in vitro compartmentalization / high throughputИзвор:
Journal of Biomolecular Screening, 2011, 16, 3, 285-294Издавач:
- Sage Publications Inc, Thousand Oaks
Финансирање / пројекти:
- BMBF [FKZ 0313137]
Напомена:
- Free full text: https://doi.org/10.1177/1087057110396361
DOI: 10.1177/1087057110396361
ISSN: 1087-0571
PubMed: 21335599
WoS: 000288037900001
Scopus: 2-s2.0-79954615462
Колекције
Институција/група
Hemijski fakultet / Faculty of ChemistryTY - JOUR AU - Tu, Ran AU - Martinez, Ronny AU - Prodanović, Radivoje AU - Klein, Mathias AU - Schwaneberg, Ulrich PY - 2011 UR - https://cherry.chem.bg.ac.rs/handle/123456789/1158 AB - Proteases are industrially important enzymes but often have to be improved for their catalytic efficiency and stabilities to suit applications. Flow cytometry screening technology based on in vitro compartmentalization in double emulsion had been developed and applied on directed evolution of paraoxonase and beta-galactosidase. Further advancements of flow cytometry-based screening technologies will enable an ultra-high throughput of variants offering novel opportunities in directed enzyme evolution under high mutational loads. For the industrially important enzyme class of proteases, a first flow cytometry-based screening system for directed protease evolution has been developed based on an extracellular protease-deficient Bacillus subtilis strain (WB800N), a model protease (subtilisin Carlsberg), and a water-in-oil-in-water double-emulsion technology. B. subtilis WB800N cells are encapsulated in double emulsion with a fluorogenic substrate (rhodamine 110-containing peptide), allowing the screening of protease variants in femtoliter compartments at high throughput. The protease screening technology was validated by employing an epPCR mutant library with a high mutational load and screened for increased resistance toward the inhibitor antipain dihydrochloride. A variant (K127R, T237P, M239I, I269V, Y310F, I372V) with an improved relative resistance was isolated from a small population of active variants, validating the reported protease flow cytometry screening technology for increased inhibitor resistance. (Journal of Biomolecular Screening 2011;16:285-294) PB - Sage Publications Inc, Thousand Oaks T2 - Journal of Biomolecular Screening T1 - A Flow Cytometry-Based Screening System for Directed Evolution of Proteases VL - 16 IS - 3 SP - 285 EP - 294 DO - 10.1177/1087057110396361 ER -
@article{ author = "Tu, Ran and Martinez, Ronny and Prodanović, Radivoje and Klein, Mathias and Schwaneberg, Ulrich", year = "2011", abstract = "Proteases are industrially important enzymes but often have to be improved for their catalytic efficiency and stabilities to suit applications. Flow cytometry screening technology based on in vitro compartmentalization in double emulsion had been developed and applied on directed evolution of paraoxonase and beta-galactosidase. Further advancements of flow cytometry-based screening technologies will enable an ultra-high throughput of variants offering novel opportunities in directed enzyme evolution under high mutational loads. For the industrially important enzyme class of proteases, a first flow cytometry-based screening system for directed protease evolution has been developed based on an extracellular protease-deficient Bacillus subtilis strain (WB800N), a model protease (subtilisin Carlsberg), and a water-in-oil-in-water double-emulsion technology. B. subtilis WB800N cells are encapsulated in double emulsion with a fluorogenic substrate (rhodamine 110-containing peptide), allowing the screening of protease variants in femtoliter compartments at high throughput. The protease screening technology was validated by employing an epPCR mutant library with a high mutational load and screened for increased resistance toward the inhibitor antipain dihydrochloride. A variant (K127R, T237P, M239I, I269V, Y310F, I372V) with an improved relative resistance was isolated from a small population of active variants, validating the reported protease flow cytometry screening technology for increased inhibitor resistance. (Journal of Biomolecular Screening 2011;16:285-294)", publisher = "Sage Publications Inc, Thousand Oaks", journal = "Journal of Biomolecular Screening", title = "A Flow Cytometry-Based Screening System for Directed Evolution of Proteases", volume = "16", number = "3", pages = "285-294", doi = "10.1177/1087057110396361" }
Tu, R., Martinez, R., Prodanović, R., Klein, M.,& Schwaneberg, U.. (2011). A Flow Cytometry-Based Screening System for Directed Evolution of Proteases. in Journal of Biomolecular Screening Sage Publications Inc, Thousand Oaks., 16(3), 285-294. https://doi.org/10.1177/1087057110396361
Tu R, Martinez R, Prodanović R, Klein M, Schwaneberg U. A Flow Cytometry-Based Screening System for Directed Evolution of Proteases. in Journal of Biomolecular Screening. 2011;16(3):285-294. doi:10.1177/1087057110396361 .
Tu, Ran, Martinez, Ronny, Prodanović, Radivoje, Klein, Mathias, Schwaneberg, Ulrich, "A Flow Cytometry-Based Screening System for Directed Evolution of Proteases" in Journal of Biomolecular Screening, 16, no. 3 (2011):285-294, https://doi.org/10.1177/1087057110396361 . .